#include <itkHDF5TransformIO.h>

Detailed Description

template<typename TParametersValueType>
class itk::HDF5TransformIOTemplate< TParametersValueType >

Read&Write transforms in HDF5 Format.

See hdfgroup.org/HDF5 – HDF5 is a physics/astrophysics format, but it is very general and can store pretty much any sort of data.

Definition at line 86 of file itkHDF5TransformIO.h.

Inheritance diagram for itk::HDF5TransformIOTemplate< TParametersValueType >:

Collaboration diagram for itk::HDF5TransformIOTemplate< TParametersValueType >:

Public Types
using	ConstTransformListType = typename TransformIOBaseTemplate< ParametersValueType >::ConstTransformListType

using	FixedParametersType = typename TransformType::FixedParametersType

using	FixedParametersValueType = typename TransformType::FixedParametersValueType

using	ParametersType = typename TransformType::ParametersType

using	ParametersValueType = typename TransformType::ParametersValueType

using	Pointer = SmartPointer< Self >

using	Self = HDF5TransformIOTemplate

using	Superclass = TransformIOBaseTemplate< TParametersValueType >

Public Types inherited from itk::TransformIOBaseTemplate< TParametersValueType >
using	ConstTransformListType = std::list< ConstTransformPointer >

using	ConstTransformPointer = typename TransformType::ConstPointer

using	FixedParametersValueType = double

using	ParametersValueType = TParametersValueType

using	Pointer = SmartPointer< Self >

using	ScalarType = TParametersValueType

using	Self = TransformIOBaseTemplate

using	Superclass = LightProcessObject

using	TransformListType = std::list< TransformPointer >

using	TransformPointer = typename TransformType::Pointer

using	TransformType = TransformBaseTemplate< ParametersValueType >

Public Types inherited from itk::LightProcessObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightProcessObject

using	Superclass = Object

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
bool	CanReadFile (const char *) override

bool	CanWriteFile (const char *) override

void	Read () override

void	Write () override

Public Member Functions inherited from itk::TransformIOBaseTemplate< TParametersValueType >
template<>
void	CorrectTransformPrecisionType (std::string &inputTransformName)

template<>
void	CorrectTransformPrecisionType (std::string &inputTransformName)

void	SetTransformList (ConstTransformListType &transformList)

virtual void	SetFileName (const char *_arg)

virtual const char *	GetFileName () const

TransformListType &	GetTransformList ()

TransformListType &	GetReadTransformList ()

ConstTransformListType &	GetWriteTransformList ()

virtual void	SetAppendMode (bool _arg)

virtual bool	GetAppendMode () const

virtual void	AppendModeOn ()

virtual void	SetUseCompression (bool _arg)

virtual bool	GetUseCompression () const

virtual void	UseCompressionOn ()

Public Member Functions inherited from itk::LightProcessObject
virtual void	AbortGenerateDataOn ()

virtual const bool &	GetAbortGenerateData () const

virtual void	SetAbortGenerateData (bool _arg)

virtual void	UpdateOutputData ()

void	UpdateProgress (float amount)

virtual void	SetProgress (float _arg)

virtual const float &	GetProgress () const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *cmd) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

LightObject::Pointer	CreateAnother () const override

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag) const

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual void	Delete ()

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

Protected Member Functions
	HDF5TransformIOTemplate ()

	~HDF5TransformIOTemplate () override

Protected Member Functions inherited from itk::TransformIOBaseTemplate< TParametersValueType >
void	CreateTransform (TransformPointer &ptr, const std::string &ClassName)

template<>
std::string	GetTypeNameString ()

template<>
std::string	GetTypeNameString ()

void	OpenStream (std::ofstream &outputStream, bool binary)

void	PrintSelf (std::ostream &os, Indent indent) const override

	TransformIOBaseTemplate ()

	~TransformIOBaseTemplate () override

Protected Member Functions inherited from itk::LightProcessObject
virtual void	GenerateData ()

	LightProcessObject ()

	~LightProcessObject () override

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Member Functions
H5::PredType	GetH5TypeFromString () const


ParametersType	ReadParameters (const std::string &DataSetName) const

FixedParametersType	ReadFixedParameters (const std::string &DataSetName) const


void	WriteParameters (const std::string &name, const ParametersType &parameters)

void	WriteFixedParameters (const std::string &name, const FixedParametersType &fixedParameters)


void	WriteString (const std::string &path, const std::string &value)

void	WriteString (const std::string &path, const char *s)

void	WriteOneTransform (const int transformIndex, const TransformType *curTransform)

Private Attributes
std::unique_ptr< H5::H5File >	m_H5File

const char *	GetNameOfClass () const override

static Pointer	New ()

Additional Inherited Members
Static Public Member Functions inherited from itk::TransformIOBaseTemplate< TParametersValueType >
static void	CorrectTransformPrecisionType (std::string &)

Static Public Member Functions inherited from itk::LightProcessObject
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Protected Member Functions inherited from itk::TransformIOBaseTemplate< TParametersValueType >
static std::string	GetTypeNameString ()

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Static Private Attributes inherited from itk::HDF5CommonPathNames
static const std::string	HDFVersion

static const std::string	ItkVersion

static const std::string	OSName

static const std::string	OSVersion

static const std::string	transformFixedName

static const std::string	transformFixedNameCorrected

static const std::string	transformFixedNameMisspelled

static const std::string	transformGroupName

static const std::string	transformParamsName

static const std::string	transformParamsNameCorrected

static const std::string	transformParamsNameMisspelled

static const std::string	transformTypeName