ITK  5.0.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage > Class Template Reference

#include <itkIsolatedWatershedImageFilter.h>

+ Inheritance diagram for itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >:
+ Collaboration diagram for itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >:

Detailed Description

template<typename TInputImage, typename TOutputImage>
class itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >

Isolate watershed basins using two seeds.

IsolatedWatershedImageFilter labels pixels with ReplaceValue1 that are in the same watershed basin as Seed1 AND NOT the same as Seed2. The filter adjusts the waterlevel until the two seeds are not in different basins. The user supplies a Watershed threshold. The algorithm uses a binary search to adjust the upper waterlevel, starting at UpperValueLimit. UpperValueLimit defaults to the 1.0.

Definition at line 41 of file itkIsolatedWatershedImageFilter.h.

Public Types

using ConstPointer = SmartPointer< const Self >
 
using GradientMagnitudeType = GradientMagnitudeImageFilter< InputImageType, RealImageType >
 
using IndexType = typename InputImageType::IndexType
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using RealImageType = Image< RealPixelType, TInputImage::ImageDimension >
 
using RealPixelType = typename NumericTraits< InputImagePixelType >::RealType
 
using Self = IsolatedWatershedImageFilter
 
using SizeType = typename InputImageType::SizeType
 
using Superclass = ImageToImageFilter< TInputImage, TOutputImage >
 
using WatershedType = WatershedImageFilter< RealImageType >
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TOutputImage >
 
- Public Types inherited from itk::ImageSource< TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual double GetIsolatedValue () const
 
virtual const char * GetNameOfClass () const
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void SetSeed1 (IndexType _arg)
 
virtual IndexType GetSeed1 () const
 
virtual void SetSeed2 (IndexType _arg)
 
virtual IndexType GetSeed2 () const
 
virtual void SetThreshold (double _arg)
 
virtual double GetThreshold () const
 
virtual void SetIsolatedValueTolerance (double _arg)
 
virtual double GetIsolatedValueTolerance () const
 
virtual void SetUpperValueLimit (double _arg)
 
virtual double GetUpperValueLimit () const
 
virtual void SetReplaceValue1 (OutputImagePixelType _arg)
 
virtual OutputImagePixelType GetReplaceValue1 () const
 
virtual void SetReplaceValue2 (OutputImagePixelType _arg)
 
virtual OutputImagePixelType GetReplaceValue2 () const
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput (unsigned int idx)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetReferenceCount (int) override
 
void UnRegister () const noexceptoverride
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Member Functions

void EnlargeOutputRequestedRegion (DataObject *output) override
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
 IsolatedWatershedImageFilter ()
 
void VerifyInputInformation () ITKv5_CONST override
 
 ~IsolatedWatershedImageFilter () override=default
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
 ~ImageToImageFilter () override
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

GradientMagnitudeType::Pointer m_GradientMagnitude
 
double m_IsolatedValue
 
double m_IsolatedValueTolerance
 
OutputImagePixelType m_ReplaceValue1
 
OutputImagePixelType m_ReplaceValue2
 
IndexType m_Seed1
 
IndexType m_Seed2
 
double m_Threshold
 
double m_UpperValueLimit
 
WatershedType::Pointer m_Watershed
 
- Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Additional Inherited Members

- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static constexpr unsigned int InputImageDimension = TInputImage::ImageDimension
 
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static
ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION 
ThreaderCallback (void *arg)
 

Member Typedef Documentation

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::ConstPointer = SmartPointer< const Self >

Definition at line 51 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GradientMagnitudeType = GradientMagnitudeImageFilter< InputImageType, RealImageType >

Definition at line 77 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::IndexType = typename InputImageType::IndexType

Definition at line 65 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::InputImageConstPointer = typename InputImageType::ConstPointer

Definition at line 62 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::InputImagePixelType = typename InputImageType::PixelType

Definition at line 64 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::InputImagePointer = typename InputImageType::Pointer

Definition at line 61 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::InputImageRegionType = typename InputImageType::RegionType

Definition at line 63 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::InputImageType = TInputImage

Definition at line 60 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::OutputImagePixelType = typename OutputImageType::PixelType

Definition at line 71 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::OutputImagePointer = typename OutputImageType::Pointer

Definition at line 69 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::OutputImageRegionType = typename OutputImageType::RegionType

Definition at line 70 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::OutputImageType = TOutputImage

Definition at line 68 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::Pointer = SmartPointer< Self >

Definition at line 50 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::RealImageType = Image<RealPixelType, TInputImage::ImageDimension>

Definition at line 74 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::RealPixelType = typename NumericTraits<InputImagePixelType>::RealType

Definition at line 73 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::Self = IsolatedWatershedImageFilter

Standard class type aliases.

Definition at line 48 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SizeType = typename InputImageType::SizeType

Definition at line 66 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::Superclass = ImageToImageFilter< TInputImage, TOutputImage >

Definition at line 49 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
using itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::WatershedType = WatershedImageFilter< RealImageType >

Definition at line 76 of file itkIsolatedWatershedImageFilter.h.

Constructor & Destructor Documentation

template<typename TInputImage , typename TOutputImage >
itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::IsolatedWatershedImageFilter ( )
protected
template<typename TInputImage , typename TOutputImage >
itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::~IsolatedWatershedImageFilter ( )
overrideprotecteddefault

Member Function Documentation

template<typename TInputImage , typename TOutputImage >
virtual::itk::LightObject::Pointer itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TInputImage , typename TOutputImage >
void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::EnlargeOutputRequestedRegion ( DataObject )
overrideprotectedvirtual

Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.

Reimplemented from itk::ProcessObject.

template<typename TInputImage , typename TOutputImage >
void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GenerateData ( )
overrideprotectedvirtual

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling DynamicThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter can be threaded, it should NOT provide a GenerateData() method but should provide a DynamicThreadedGenerateData() instead.

See Also
ThreadedGenerateData()

Reimplemented from itk::ImageSource< TOutputImage >.

template<typename TInputImage , typename TOutputImage >
void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GenerateInputRequestedRegion ( )
overrideprotectedvirtual

What is the input requested region that is required to produce the output requested region? The base assumption for image processing filters is that the input requested region can be set to match the output requested region. If a filter requires more input (for instance a filter that uses neighborhoods needs more input than output to avoid introducing artificial boundary conditions) or less input (for instance a magnify filter) will have to override this method. In doing so, it should call its superclass' implementation as its first step. Note that imaging filters operate differently than the classes to this point in the class hierarchy. Up till now, the base assumption has been that the largest possible region will be requested of the input.

This implementation of GenerateInputRequestedRegion() only processes the inputs that are a subclass of the ImageBase<InputImageDimension>. If an input is another type of DataObject (including an Image of a different dimension), they are skipped by this method. The subclasses of ImageToImageFilter are responsible for providing an implementation of GenerateInputRequestedRegion() when there are multiple inputs of different types.

See Also
ProcessObject::GenerateInputRequestedRegion(), ImageSource::GenerateInputRequestedRegion()

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >
virtual double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetIsolatedValue ( ) const
virtual

Get value that isolates the two seeds.

template<typename TInputImage , typename TOutputImage >
virtual double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetIsolatedValueTolerance ( ) const
virtual

Set/Get the precision required for the intensity threshold value. The default is .001.

template<typename TInputImage , typename TOutputImage >
virtual const char* itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >
virtual OutputImagePixelType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetReplaceValue1 ( ) const
virtual

Set/Get value to replace Seed1(Seed2) pixels, pixels that are within the basin that contains Seed1(Seed2) this value. The default is 1(0).

template<typename TInputImage , typename TOutputImage >
virtual OutputImagePixelType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetReplaceValue2 ( ) const
virtual

Set/Get value to replace Seed1(Seed2) pixels, pixels that are within the basin that contains Seed1(Seed2) this value. The default is 1(0).

template<typename TInputImage , typename TOutputImage >
virtual IndexType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetSeed1 ( ) const
virtual

Set seed point 1. This seed will be isolated from Seed2 (if possible). All pixels connected to this seed will be replaced with ReplaceValue1.

template<typename TInputImage , typename TOutputImage >
virtual IndexType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetSeed2 ( ) const
virtual

Set seed point 2. This seed will be isolated from Seed1 (if possible). All pixels connected to this seed will be replaced with ReplaceValue2.

template<typename TInputImage , typename TOutputImage >
virtual double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetThreshold ( ) const
virtual

Set/Get the Watershed threshold. The default is 0.

template<typename TInputImage , typename TOutputImage >
virtual double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::GetUpperValueLimit ( ) const
virtual

Set/Get the limit on the upper waterlevel value. The default is 1.0.

template<typename TInputImage , typename TOutputImage >
static Pointer itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::New ( )
static

Method for creation through the object factory.

template<typename TInputImage , typename TOutputImage >
void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overridevirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetIsolatedValueTolerance ( double  _arg)
virtual

Set/Get the precision required for the intensity threshold value. The default is .001.

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetReplaceValue1 ( OutputImagePixelType  _arg)
virtual

Set/Get value to replace Seed1(Seed2) pixels, pixels that are within the basin that contains Seed1(Seed2) this value. The default is 1(0).

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetReplaceValue2 ( OutputImagePixelType  _arg)
virtual

Set/Get value to replace Seed1(Seed2) pixels, pixels that are within the basin that contains Seed1(Seed2) this value. The default is 1(0).

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetSeed1 ( IndexType  _arg)
virtual

Set seed point 1. This seed will be isolated from Seed2 (if possible). All pixels connected to this seed will be replaced with ReplaceValue1.

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetSeed2 ( IndexType  _arg)
virtual

Set seed point 2. This seed will be isolated from Seed1 (if possible). All pixels connected to this seed will be replaced with ReplaceValue2.

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetThreshold ( double  _arg)
virtual

Set/Get the Watershed threshold. The default is 0.

template<typename TInputImage , typename TOutputImage >
virtual void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::SetUpperValueLimit ( double  _arg)
virtual

Set/Get the limit on the upper waterlevel value. The default is 1.0.

template<typename TInputImage , typename TOutputImage >
void itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::VerifyInputInformation ( )
overrideprotectedvirtual

Verifies that the input images occupy the same physical space and the each index is at the same physical location.

The default implementation of the PropagateRequestedRegion methods copies the index and size from the output to the input. This makes an implicit assumption that the images occupy the same physical location at each voxel. This method enforces that they are the same.

This implementation verifies that all input images of InputImageDimensions have the same origin, spacing and direction.

Filters which do not expect all input images to be at the same physical location should over-ride this method. Also filters whose inputs are different dimensions may need to overide this method.

See Also
ProcessObject::VerifyInputInformation

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Member Data Documentation

template<typename TInputImage , typename TOutputImage >
GradientMagnitudeType::Pointer itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_GradientMagnitude
protected

Definition at line 132 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_IsolatedValue
protected

Definition at line 137 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_IsolatedValueTolerance
protected

Definition at line 138 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
OutputImagePixelType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_ReplaceValue1
protected

Definition at line 129 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
OutputImagePixelType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_ReplaceValue2
protected

Definition at line 130 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
IndexType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_Seed1
protected

Definition at line 126 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
IndexType itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_Seed2
protected

Definition at line 127 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_Threshold
protected

Definition at line 136 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
double itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_UpperValueLimit
protected

Definition at line 139 of file itkIsolatedWatershedImageFilter.h.

template<typename TInputImage , typename TOutputImage >
WatershedType::Pointer itk::IsolatedWatershedImageFilter< TInputImage, TOutputImage >::m_Watershed
protected

Definition at line 134 of file itkIsolatedWatershedImageFilter.h.


The documentation for this class was generated from the following file: