ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Protected Member Functions | Private Member Functions | Private Attributes
itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage > Class Template Reference
Similarity Metrics of Registration Methods | Module ITKRegistrationCommon

#include <itkCompareHistogramImageToImageMetric.h>

+ Inheritance diagram for itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >:
+ Collaboration diagram for itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >:

List of all members.

Public Types

typedef SmartPointer< const Self > ConstPointer
typedef Superclass::DerivativeType DerivativeType
typedef
Superclass::FixedImageConstPointer 		FixedImageConstPointer
typedef
Superclass::FixedImageRegionType 		FixedImageRegionType
typedef Superclass::FixedImageType FixedImageType
typedef
Superclass::GradientPixelType 		GradientPixelType
typedef
HistogramType::AbsoluteFrequencyType 		HistogramAbsoluteFrequencyType
typedef
HistogramAbsoluteFrequencyType 		HistogramFrequencyType
typedef HistogramType::Iterator HistogramIteratorType
typedef
HistogramType::MeasurementVectorType 		HistogramMeasurementVectorType
typedef HistogramType::Pointer HistogramPointerType
typedef
Superclass::HistogramSizeType 		HistogramSizeType
typedef Superclass::HistogramType HistogramType
typedef
Superclass::InterpolatorPointer 		InterpolatorPointer
typedef
Superclass::InterpolatorType 		InterpolatorType
typedef Superclass::MeasureType MeasureType
typedef
Superclass::MovingImageConstPointer 		MovingImageConstPointer
typedef Superclass::MovingImageType MovingImageType
typedef SmartPointer< Self > Pointer
typedef Superclass::RealType RealType
typedef
CompareHistogramImageToImageMetric 		Self
typedef
HistogramImageToImageMetric
< TFixedImage, TMovingImage > 		Superclass
typedef TransformType::ConstPointer TransformConstPointer
typedef
Superclass::TransformJacobianType 		TransformJacobianType
typedef
Superclass::TransformParametersType 		TransformParametersType
typedef
Superclass::TransformPointer 		TransformPointer
typedef Superclass::TransformType TransformType
- Public Types inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
typedef
Superclass::FixedImageConstPointer 		FixedImageConstPointerType
typedef
Superclass::FixedImageType::PixelType 		FixedImagePixelType
typedef HistogramType::Pointer HistogramPointer
typedef Superclass::InputPointType InputPointType
typedef
HistogramType::MeasurementVectorType 		MeasurementVectorType
typedef
Superclass::MovingImageConstPointer 		MovingImageConstPointerType
typedef
Superclass::MovingImageType::PixelType 		MovingImagePixelType
typedef Superclass::OutputPointType OutputPointType
typedef Array< double > ScalesType
- Public Types inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
typedef
Superclass::ParametersValueType 		CoordinateRepresentationType
typedef std::vector
< FixedImageIndexType > 		FixedImageIndexContainer
typedef FixedImageType::IndexType FixedImageIndexType
typedef
FixedImageIndexType::IndexValueType 		FixedImageIndexValueType
typedef
FixedImageMaskType::ConstPointer 		FixedImageMaskConstPointer
typedef FixedImageMaskType::Pointer FixedImageMaskPointer
typedef SpatialObject
< itkGetStaticConstMacro(FixedImageDimension) > 		FixedImageMaskType
typedef
TransformType::InputPointType 		FixedImagePointType
typedef MovingImageType::IndexType MovingImageIndexType
typedef
MovingImageMaskType::ConstPointer 		MovingImageMaskConstPointer
typedef
MovingImageMaskType::Pointer 		MovingImageMaskPointer
typedef SpatialObject
< itkGetStaticConstMacro(MovingImageDimension) > 		MovingImageMaskType
typedef
TransformType::OutputPointType 		MovingImagePointType
typedef MultiThreader MultiThreaderType
typedef Superclass::ParametersType ParametersType
typedef Image
< GradientPixelType,
itkGetStaticConstMacro(MovingImageDimension) > 		GradientImageType
typedef SmartPointer
< GradientImageType > 		GradientImagePointer
typedef
GradientRecursiveGaussianImageFilter
< MovingImageType,
GradientImageType > 		GradientImageFilterType
typedef
GradientImageFilterType::Pointer 		GradientImageFilterPointer
- Public Types inherited from itk::SingleValuedCostFunction
typedef
Superclass::ParametersValueType 		ParametersValueType
- Public Types inherited from itk::CostFunction
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual const char * GetNameOfClass () const
unsigned int GetNumberOfParameters (void) const
virtual const FixedImageType * GetTrainingFixedImage ()
virtual const
FixedImageRegionType & 		GetTrainingFixedImageRegion ()
virtual const
HistogramPointerType & 		GetTrainingHistogram ()
virtual InterpolatorType * GetTrainingInterpolator ()
virtual const MovingImageType * GetTrainingMovingImage ()
virtual TransformType * GetTrainingTransform ()
void Initialize () throw ( ExceptionObject )
virtual void SetTrainingFixedImage (const FixedImageType *_arg)
virtual void SetTrainingFixedImageRegion (FixedImageRegionType _arg)
virtual void SetTrainingHistogram (HistogramPointerType _arg)
virtual void SetTrainingInterpolator (InterpolatorType *_arg)
virtual void SetTrainingMovingImage (const MovingImageType *_arg)
virtual void SetTrainingTransform (TransformType *_arg)
- Public Member Functions inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
void GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const
virtual double GetDerivativeStepLength () const
virtual const ScalesType & GetDerivativeStepLengthScales ()
virtual const HistogramPointer & GetHistogram ()
virtual const HistogramSizeType & GetHistogramSize ()
virtual const FixedImagePixelType & GetPaddingValue ()
MeasureType GetValue (const TransformParametersType &parameters) const
void GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const
virtual void SetDerivativeStepLength (double _arg)
virtual void SetDerivativeStepLengthScales (ScalesType _arg)
virtual void SetHistogramSize (HistogramSizeType _arg)
void SetLowerBound (const MeasurementVectorType &bound)
virtual void SetPaddingValue (FixedImagePixelType _arg)
void SetTransform (TransformType *transform)
void SetUpperBound (const MeasurementVectorType &bound)
virtual void SetUpperBoundIncreaseFactor (double _arg)
virtual double GetUpperBoundIncreaseFactor () const
virtual void SetUsePaddingValue (bool _arg)
virtual bool GetUsePaddingValue () const
- Public Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void ComputeGradient (void)
virtual const FixedImageType * GetFixedImage ()
virtual const
FixedImageRegionType & 		GetFixedImageRegion ()
virtual const FixedImagePixelType & GetFixedImageSamplesIntensityThreshold ()
virtual const GradientImageType * GetGradientImage ()
virtual const InterpolatorType * GetInterpolator ()
virtual const MovingImageType * GetMovingImage ()
SizeValueType GetNumberOfMovingImageSamples (void)
virtual const SizeValueType & GetNumberOfPixelsCounted ()
SizeValueType GetNumberOfSpatialSamples (void)
virtual const TransformType * GetTransform ()
virtual const bool & GetUseAllPixels ()
virtual const bool & GetUseFixedImageIndexes ()
virtual const bool & GetUseFixedImageSamplesIntensityThreshold ()
virtual const bool & GetUseSequentialSampling ()
virtual void MultiThreadingInitialize (void) throw ( ExceptionObject )
virtual void SetFixedImage (const FixedImageType *_arg)
void SetFixedImageIndexes (const FixedImageIndexContainer &indexes)
void SetFixedImageRegion (const FixedImageRegionType reg)
void SetFixedImageSamplesIntensityThreshold (const FixedImagePixelType &thresh)
virtual void SetInterpolator (InterpolatorType *_arg)
virtual void SetMovingImage (const MovingImageType *_arg)
void SetNumberOfSpatialSamples (SizeValueType num)
virtual void SetTransform (TransformType *_arg)
void SetTransformParameters (const ParametersType &parameters) const
void SetUseAllPixels (bool useAllPixels)
void SetUseFixedImageIndexes (bool useIndex)
void SetUseFixedImageSamplesIntensityThreshold (bool useThresh)
void SetUseSequentialSampling (bool sequentialSampling)
void UseAllPixelsOff (void)
void UseAllPixelsOn (void)
virtual void SetMovingImageMask (MovingImageMaskType *_arg)
virtual void SetMovingImageMask (const MovingImageMaskType *_arg)
virtual const MovingImageMaskType * GetMovingImageMask ()
virtual void SetFixedImageMask (FixedImageMaskType *_arg)
virtual void SetFixedImageMask (const FixedImageMaskType *_arg)
virtual const FixedImageMaskType * GetFixedImageMask ()
void SetNumberOfThreads (ThreadIdType numberOfThreads)
virtual const ThreadIdType & GetNumberOfThreads ()
virtual void SetComputeGradient (bool _arg)
virtual const bool & GetComputeGradient ()
virtual void ComputeGradientOn ()
virtual void ComputeGradientOff ()
virtual void SetNumberOfFixedImageSamples (SizeValueType numSamples)
virtual const SizeValueType & GetNumberOfFixedImageSamples ()
void ReinitializeSeed ()
void ReinitializeSeed (int seed)
virtual void SetUseCachingOfBSplineWeights (bool _arg)
virtual const bool & GetUseCachingOfBSplineWeights ()
virtual void UseCachingOfBSplineWeightsOn ()
virtual void UseCachingOfBSplineWeightsOff ()
virtual const MultiThreaderType * GetThreader ()
const TransformPointer * GetThreaderTransform ()
- Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const =0
virtual MeasureType GetValue (const ParametersType &parameters) const =0
virtual void GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Protected Member Functions

virtual MeasureType EvaluateMeasure (HistogramType &histogram) const =0
void FormTrainingHistogram () throw ( ExceptionObject )
 CompareHistogramImageToImageMetric ()
virtual ~CompareHistogramImageToImageMetric ()
void PrintSelf (std::ostream &os, Indent indent) const
- Protected Member Functions inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
void ComputeHistogram (const TransformParametersType &parameters, HistogramType &histogram) const
void ComputeHistogram (const TransformParametersType &parameters, unsigned int parameter, double step, HistogramType &histogram) const
void CopyHistogram (HistogramType &target, HistogramType &source) const
virtual MeasureType EvaluateMeasure (HistogramType &histogram) const =0
 HistogramImageToImageMetric ()
virtual ~HistogramImageToImageMetric ()
- Protected Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void ComputeImageDerivatives (const MovingImagePointType &mappedPoint, ImageDerivativesType &gradient, ThreadIdType threadID) const
void GetValueAndDerivativeMultiThreadedInitiate (void) const
void GetValueAndDerivativeMultiThreadedPostProcessInitiate (void) const
void GetValueAndDerivativeMultiThreadedPreProcessInitiate (void) const
virtual void GetValueAndDerivativeThread (ThreadIdType threadID) const
virtual void GetValueAndDerivativeThreadPostProcess (ThreadIdType, bool) const
virtual void GetValueAndDerivativeThreadPreProcess (ThreadIdType, bool) const
virtual bool GetValueAndDerivativeThreadProcessSample (ThreadIdType, SizeValueType, const MovingImagePointType &, double, const ImageDerivativesType &) const
void GetValueMultiThreadedInitiate (void) const
void GetValueMultiThreadedPostProcessInitiate (void) const
void GetValueMultiThreadedPreProcessInitiate (void) const
virtual void GetValueThread (ThreadIdType threadID) const
virtual void GetValueThreadPostProcess (ThreadIdType, bool) const
virtual void GetValueThreadPreProcess (ThreadIdType, bool) const
virtual bool GetValueThreadProcessSample (ThreadIdType, SizeValueType, const MovingImagePointType &, double) const
 ImageToImageMetric ()
virtual void PreComputeTransformValues (void)
virtual void SampleFixedImageIndexes (FixedImageSampleContainer &samples) const
virtual void SampleFixedImageRegion (FixedImageSampleContainer &samples) const
virtual void SampleFullFixedImageRegion (FixedImageSampleContainer &samples) const
virtual void SynchronizeTransforms () const
virtual void TransformPoint (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ThreadIdType threadID) const
virtual void TransformPointWithDerivatives (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ImageDerivativesType &gradient, ThreadIdType threadID) const
virtual ~ImageToImageMetric ()
- Protected Member Functions inherited from itk::SingleValuedCostFunction
 SingleValuedCostFunction ()
virtual ~SingleValuedCostFunction ()
- Protected Member Functions inherited from itk::CostFunction
 CostFunction ()
virtual ~CostFunction ()
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Private Member Functions

 CompareHistogramImageToImageMetric (Self const &)
void operator= (Self const &)

Private Attributes

FixedImageConstPointer m_TrainingFixedImage
FixedImageRegionType m_TrainingFixedImageRegion
HistogramPointerType m_TrainingHistogram
InterpolatorPointer m_TrainingInterpolator
MovingImageConstPointer m_TrainingMovingImage
TransformPointer m_TrainingTransform

Additional Inherited Members

- Protected Attributes inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
HistogramSizeType m_HistogramSize
MeasurementVectorType m_LowerBound
bool m_LowerBoundSetByUser
MeasurementVectorType m_UpperBound
double m_UpperBoundIncreaseFactor
bool m_UpperBoundSetByUser
- Protected Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
BSplineInterpolatorType::Pointer m_BSplineInterpolator
BSplineParametersOffsetType m_BSplineParametersOffset
MovingImagePointArrayType m_BSplinePreTransformPointsArray
BSplineTransformType::Pointer m_BSplineTransform
BSplineTransformIndexArrayType m_BSplineTransformIndices
BSplineTransformIndicesArrayType m_BSplineTransformIndicesArray
BSplineTransformWeightsType m_BSplineTransformWeights
BSplineTransformWeightsArrayType m_BSplineTransformWeightsArray
bool m_ComputeGradient
DerivativeFunctionType::Pointer m_DerivativeCalculator
FixedImageConstPointer m_FixedImage
FixedImageIndexContainer m_FixedImageIndexes
FixedImageMaskConstPointer m_FixedImageMask
FixedImageSampleContainer m_FixedImageSamples
FixedImagePixelType m_FixedImageSamplesIntensityThreshold
GradientImagePointer m_GradientImage
InterpolatorPointer m_Interpolator
bool m_InterpolatorIsBSpline
MovingImageConstPointer m_MovingImage
MovingImageMaskConstPointer m_MovingImageMask
SizeValueType m_NumberOfFixedImageSamples
SizeValueType m_NumberOfParameters
SizeValueType m_NumberOfPixelsCounted
ThreadIdType m_NumberOfThreads
SizeValueType m_NumBSplineWeights
int m_RandomSeed
bool m_ReseedIterator
MultiThreaderType::Pointer m_Threader
BSplineTransformIndexArrayType * m_ThreaderBSplineTransformIndices
BSplineTransformWeightsType * m_ThreaderBSplineTransformWeights
unsigned int * m_ThreaderNumberOfMovingImageSamples
MultiThreaderParameterType m_ThreaderParameter
TransformPointer * m_ThreaderTransform
TransformPointer m_Transform
bool m_TransformIsBSpline
bool m_UseAllPixels
bool m_UseCachingOfBSplineWeights
bool m_UseFixedImageIndexes
bool m_UseFixedImageSamplesIntensityThreshold
bool m_UseSequentialSampling
BooleanArrayType m_WithinBSplineSupportRegionArray
bool m_WithinThreadPostProcess
bool m_WithinThreadPreProcess

Detailed Description

template<class TFixedImage, class TMovingImage>
class itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >

Compares Histograms between two images to be registered to a Training Histogram.

This class is templated over the type of the fixed and moving images to be compared.

This metric computes the similarity between the histogram produced by two images overlapping and a training histogram.

It is to be sub-classed by the method of comparing the histograms.

Generally, the histogram from the training data is to be computed in exactly the same way as the histogram from the images to be compared are computed. Thus, the user can set the interpolator, region, two training images and the transfrom and the training histogram will be formed. OR, the user can simply calculate the training histogram separately and set it.

Warning:
The Initialize function does nothing if the training histogram already exists. Thus repeated calls to the Initialize function do nothing after the first call. If you wish the training histogram to be re-calculated, you should set it to 0.
Author:
Samson Timoner.

Definition at line 56 of file itkCompareHistogramImageToImageMetric.h.

Member Typedef Documentation

template<class TFixedImage , class TMovingImage >
typedef SmartPointer< const Self > itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 64 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::DerivativeType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType

Type of the derivative.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 81 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageConstPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 84 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageRegionType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageRegionType

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 101 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType

Type of the fixed Image.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 82 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::GradientPixelType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType

Gaussian filter to compute the gradient of the Moving Image

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 78 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::AbsoluteFrequencyType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramAbsoluteFrequencyType

Definition at line 91 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramAbsoluteFrequencyType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramFrequencyType

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 92 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::Iterator itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramIteratorType

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 94 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::MeasurementVectorType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramMeasurementVectorType

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 90 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::Pointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramPointerType

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 95 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::HistogramSizeType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramSizeType

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 89 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::HistogramType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramType

Typedefs for histogram. This should have been defined as Histogram<RealType,2> but a bug in VC++7 produced an internal compiler error with such declaration.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 88 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::InterpolatorPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::InterpolatorPointer

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 98 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::InterpolatorType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::InterpolatorType

Type of the Interpolator Base class

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 97 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MeasureType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::MeasureType

Type of the measure.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 80 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageConstPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 86 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType

Type of the moving Image.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 83 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef SmartPointer< Self > itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::Pointer

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 63 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::RealType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::RealType

Types transferred from the base class

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 68 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef CompareHistogramImageToImageMetric itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::Self

Standard class typedefs.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 61 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramImageToImageMetric< TFixedImage, TMovingImage > itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::Superclass

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 62 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef TransformType::ConstPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformConstPointer

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 74 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformJacobianType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 77 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformParametersType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 76 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 73 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformType

Type of the Transform Base class

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 72 of file itkCompareHistogramImageToImageMetric.h.

Constructor & Destructor Documentation

template<class TFixedImage , class TMovingImage >
itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::CompareHistogramImageToImageMetric ( )
protected

Constructor is protected to ensure that New() function is used to create instances.

template<class TFixedImage , class TMovingImage >
virtual itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::~CompareHistogramImageToImageMetric ( )
inlineprotectedvirtual

Constructor is protected to ensure that New() function is used to create instances.

Definition at line 152 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::CompareHistogramImageToImageMetric ( Self const &  )
private

Member Function Documentation

template<class TFixedImage , class TMovingImage >
virtual MeasureType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::EvaluateMeasure ( HistogramType &  histogram) const
protectedpure virtual

Evaluates the comparison histogram metric. All sub-classes must re-implement method.

Implemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::FormTrainingHistogram ( ) throw ( ExceptionObject )
protected

Form the Histogram for the Training data

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
virtual const char* itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
unsigned int itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetNumberOfParameters ( void  ) const
inlinevirtual

Return the number of parameters required by the Transform

Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 140 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
virtual const FixedImageType* itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetTrainingFixedImage ( )
virtual

Get the Training Fixed Image.

template<class TFixedImage , class TMovingImage >
virtual const FixedImageRegionType& itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetTrainingFixedImageRegion ( )
virtual

Get the region over which the training histogram will be computed

template<class TFixedImage , class TMovingImage >
virtual const HistogramPointerType& itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetTrainingHistogram ( )
virtual

Get the histogram to be used in the metric calculation

template<class TFixedImage , class TMovingImage >
virtual InterpolatorType* itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetTrainingInterpolator ( )
virtual

Get a pointer to the Interpolator.

template<class TFixedImage , class TMovingImage >
virtual const MovingImageType* itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetTrainingMovingImage ( )
virtual

Get the Training Moving Image.

template<class TFixedImage , class TMovingImage >
virtual TransformType* itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetTrainingTransform ( )
virtual

Get a pointer to the Transform.

template<class TFixedImage , class TMovingImage >
void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::Initialize ( ) throw ( ExceptionObject )
virtual

Forms the histogram of the training images to prepare to evaluate the metric. Must set all parameters first.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::operator= ( Self const &  )
private

Mutex lock to protect modification to the reference count

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Constructor is protected to ensure that New() function is used to create instances.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
virtual void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTrainingFixedImage ( const FixedImageType *  _arg)
virtual

Set the Training Fixed Image.

template<class TFixedImage , class TMovingImage >
virtual void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTrainingFixedImageRegion ( FixedImageRegionType  _arg)
virtual

Set the region over which the training histogram will be computed

template<class TFixedImage , class TMovingImage >
virtual void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTrainingHistogram ( HistogramPointerType  _arg)
virtual

Set the histogram to be used in the metric calculation

template<class TFixedImage , class TMovingImage >
virtual void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTrainingInterpolator ( InterpolatorType *  _arg)
virtual

Set the Interpolator.

template<class TFixedImage , class TMovingImage >
virtual void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTrainingMovingImage ( const MovingImageType *  _arg)
virtual

Set the Training Moving Image.

template<class TFixedImage , class TMovingImage >
virtual void itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTrainingTransform ( TransformType *  _arg)
virtual

Set the Training Transform.

Member Data Documentation

template<class TFixedImage , class TMovingImage >
FixedImageConstPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::m_TrainingFixedImage
private

Definition at line 169 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
FixedImageRegionType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::m_TrainingFixedImageRegion
private

Definition at line 173 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
HistogramPointerType itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::m_TrainingHistogram
private

Definition at line 174 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
InterpolatorPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::m_TrainingInterpolator
private

Definition at line 172 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
MovingImageConstPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::m_TrainingMovingImage
private

Definition at line 170 of file itkCompareHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
TransformPointer itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >::m_TrainingTransform
private

Definition at line 171 of file itkCompareHistogramImageToImageMetric.h.

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