ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Protected Member Functions | Protected Attributes | Private Member Functions | Private Attributes
itk::HistogramImageToImageMetric< TFixedImage, TMovingImage > Class Template Reference

#include <itkHistogramImageToImageMetric.h>

+ Inheritance diagram for itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >:
+ Collaboration diagram for itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >:

List of all members.

Public Types

typedef SmartPointer< const SelfConstPointer
typedef Superclass::DerivativeType DerivativeType
typedef
Superclass::FixedImageConstPointer 
FixedImageConstPointerType
typedef
Superclass::FixedImageType::PixelType 
FixedImagePixelType
typedef Superclass::FixedImageType FixedImageType
typedef
Superclass::GradientPixelType 
GradientPixelType
typedef HistogramType::Pointer HistogramPointer
typedef HistogramType::SizeType HistogramSizeType
typedef Statistics::Histogram
< double > 
HistogramType
typedef Superclass::InputPointType InputPointType
typedef
HistogramType::MeasurementVectorType 
MeasurementVectorType
typedef Superclass::MeasureType MeasureType
typedef
Superclass::MovingImageConstPointer 
MovingImageConstPointerType
typedef
Superclass::MovingImageType::PixelType 
MovingImagePixelType
typedef Superclass::MovingImageType MovingImageType
typedef Superclass::OutputPointType OutputPointType
typedef SmartPointer< SelfPointer
typedef Superclass::RealType RealType
typedef Array< double > ScalesType
typedef HistogramImageToImageMetric Self
typedef ImageToImageMetric
< TFixedImage, TMovingImage > 
Superclass
typedef
Superclass::TransformJacobianType 
TransformJacobianType
typedef
Superclass::TransformParametersType 
TransformParametersType
typedef
Superclass::TransformPointer 
TransformPointer
typedef Superclass::TransformType TransformType
- Public Types inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
typedef
Superclass::ParametersValueType 
CoordinateRepresentationType
typedef
FixedImageType::ConstPointer 
FixedImageConstPointer
typedef std::vector
< FixedImageIndexType
FixedImageIndexContainer
typedef FixedImageType::IndexType FixedImageIndexType
typedef
FixedImageIndexType::IndexValueType 
FixedImageIndexValueType
typedef
FixedImageMaskType::ConstPointer 
FixedImageMaskConstPointer
typedef FixedImageMaskType::Pointer FixedImageMaskPointer
typedef SpatialObject
< itkGetStaticConstMacro(FixedImageDimension) > 
FixedImageMaskType
typedef
TransformType::InputPointType 
FixedImagePointType
typedef FixedImageType::RegionType FixedImageRegionType
typedef InterpolatorType::Pointer InterpolatorPointer
typedef
InterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType
InterpolatorType
typedef
MovingImageType::ConstPointer 
MovingImageConstPointer
typedef MovingImageType::IndexType MovingImageIndexType
typedef
MovingImageMaskType::ConstPointer 
MovingImageMaskConstPointer
typedef
MovingImageMaskType::Pointer 
MovingImageMaskPointer
typedef SpatialObject
< itkGetStaticConstMacro(MovingImageDimension) > 
MovingImageMaskType
typedef
TransformType::OutputPointType 
MovingImagePointType
typedef MultiThreader MultiThreaderType
typedef Superclass::ParametersType ParametersType
typedef Image
< GradientPixelType,
itkGetStaticConstMacro(MovingImageDimension) > 
GradientImageType
typedef SmartPointer
< GradientImageType
GradientImagePointer
typedef
GradientRecursiveGaussianImageFilter
< MovingImageType,
GradientImageType
GradientImageFilterType
typedef
GradientImageFilterType::Pointer 
GradientImageFilterPointer
- Public Types inherited from itk::SingleValuedCostFunction
typedef
Superclass::ParametersValueType 
ParametersValueType
- Public Types inherited from itk::CostFunction
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

void GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const
virtual double GetDerivativeStepLength () const
virtual const ScalesTypeGetDerivativeStepLengthScales ()
virtual const HistogramPointerGetHistogram ()
virtual const HistogramSizeTypeGetHistogramSize ()
virtual const char * GetNameOfClass () const
virtual const FixedImagePixelTypeGetPaddingValue ()
MeasureType GetValue (const TransformParametersType &parameters) const
void GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const
void Initialize () throw ( ExceptionObject )
virtual void SetDerivativeStepLength (double _arg)
virtual void SetDerivativeStepLengthScales (ScalesType _arg)
virtual void SetHistogramSize (HistogramSizeType _arg)
void SetLowerBound (const MeasurementVectorType &bound)
virtual void SetPaddingValue (FixedImagePixelType _arg)
void SetTransform (TransformType *transform)
void SetUpperBound (const MeasurementVectorType &bound)
virtual void SetUpperBoundIncreaseFactor (double _arg)
virtual double GetUpperBoundIncreaseFactor () const
virtual void SetUsePaddingValue (bool _arg)
virtual bool GetUsePaddingValue () const
- Public Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void ComputeGradient (void)
virtual const FixedImageTypeGetFixedImage ()
virtual const
FixedImageRegionType
GetFixedImageRegion ()
virtual const FixedImagePixelTypeGetFixedImageSamplesIntensityThreshold ()
virtual const GradientImageTypeGetGradientImage ()
virtual const InterpolatorTypeGetInterpolator ()
virtual const MovingImageTypeGetMovingImage ()
SizeValueType GetNumberOfMovingImageSamples (void)
unsigned int GetNumberOfParameters (void) const
virtual const SizeValueTypeGetNumberOfPixelsCounted ()
SizeValueType GetNumberOfSpatialSamples (void)
virtual const TransformTypeGetTransform ()
virtual const bool & GetUseAllPixels ()
virtual const bool & GetUseFixedImageIndexes ()
virtual const bool & GetUseFixedImageSamplesIntensityThreshold ()
virtual const bool & GetUseSequentialSampling ()
virtual void MultiThreadingInitialize (void) throw ( ExceptionObject )
virtual void SetFixedImage (const FixedImageType *_arg)
void SetFixedImageIndexes (const FixedImageIndexContainer &indexes)
void SetFixedImageRegion (const FixedImageRegionType reg)
void SetFixedImageSamplesIntensityThreshold (const FixedImagePixelType &thresh)
virtual void SetInterpolator (InterpolatorType *_arg)
virtual void SetMovingImage (const MovingImageType *_arg)
void SetNumberOfSpatialSamples (SizeValueType num)
virtual void SetTransform (TransformType *_arg)
void SetTransformParameters (const ParametersType &parameters) const
void SetUseAllPixels (bool useAllPixels)
void SetUseFixedImageIndexes (bool useIndex)
void SetUseFixedImageSamplesIntensityThreshold (bool useThresh)
void SetUseSequentialSampling (bool sequentialSampling)
void UseAllPixelsOff (void)
void UseAllPixelsOn (void)
virtual void SetMovingImageMask (MovingImageMaskType *_arg)
virtual void SetMovingImageMask (const MovingImageMaskType *_arg)
virtual const MovingImageMaskTypeGetMovingImageMask ()
virtual void SetFixedImageMask (FixedImageMaskType *_arg)
virtual void SetFixedImageMask (const FixedImageMaskType *_arg)
virtual const FixedImageMaskTypeGetFixedImageMask ()
void SetNumberOfThreads (ThreadIdType numberOfThreads)
virtual const ThreadIdTypeGetNumberOfThreads ()
virtual void SetComputeGradient (bool _arg)
virtual const bool & GetComputeGradient ()
virtual void ComputeGradientOn ()
virtual void ComputeGradientOff ()
virtual void SetNumberOfFixedImageSamples (SizeValueType numSamples)
virtual const SizeValueTypeGetNumberOfFixedImageSamples ()
void ReinitializeSeed ()
void ReinitializeSeed (int seed)
virtual void SetUseCachingOfBSplineWeights (bool _arg)
virtual const bool & GetUseCachingOfBSplineWeights ()
virtual void UseCachingOfBSplineWeightsOn ()
virtual void UseCachingOfBSplineWeightsOff ()
virtual const MultiThreaderTypeGetThreader ()
const TransformPointerGetThreaderTransform ()
- Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const =0
virtual MeasureType GetValue (const ParametersType &parameters) const =0
virtual void GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Protected Member Functions

void ComputeHistogram (const TransformParametersType &parameters, HistogramType &histogram) const
void ComputeHistogram (const TransformParametersType &parameters, unsigned int parameter, double step, HistogramType &histogram) const
void CopyHistogram (HistogramType &target, HistogramType &source) const
virtual MeasureType EvaluateMeasure (HistogramType &histogram) const =0
 HistogramImageToImageMetric ()
void PrintSelf (std::ostream &os, Indent indent) const
virtual ~HistogramImageToImageMetric ()
- Protected Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void ComputeImageDerivatives (const MovingImagePointType &mappedPoint, ImageDerivativesType &gradient, ThreadIdType threadID) const
void GetValueAndDerivativeMultiThreadedInitiate (void) const
void GetValueAndDerivativeMultiThreadedPostProcessInitiate (void) const
void GetValueAndDerivativeMultiThreadedPreProcessInitiate (void) const
virtual void GetValueAndDerivativeThread (ThreadIdType threadID) const
virtual void GetValueAndDerivativeThreadPostProcess (ThreadIdType, bool) const
virtual void GetValueAndDerivativeThreadPreProcess (ThreadIdType, bool) const
virtual bool GetValueAndDerivativeThreadProcessSample (ThreadIdType, SizeValueType, const MovingImagePointType &, double, const ImageDerivativesType &) const
void GetValueMultiThreadedInitiate (void) const
void GetValueMultiThreadedPostProcessInitiate (void) const
void GetValueMultiThreadedPreProcessInitiate (void) const
virtual void GetValueThread (ThreadIdType threadID) const
virtual void GetValueThreadPostProcess (ThreadIdType, bool) const
virtual void GetValueThreadPreProcess (ThreadIdType, bool) const
virtual bool GetValueThreadProcessSample (ThreadIdType, SizeValueType, const MovingImagePointType &, double) const
 ImageToImageMetric ()
virtual void PreComputeTransformValues (void)
virtual void SampleFixedImageIndexes (FixedImageSampleContainer &samples) const
virtual void SampleFixedImageRegion (FixedImageSampleContainer &samples) const
virtual void SampleFullFixedImageRegion (FixedImageSampleContainer &samples) const
virtual void SynchronizeTransforms () const
virtual void TransformPoint (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ThreadIdType threadID) const
virtual void TransformPointWithDerivatives (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ImageDerivativesType &gradient, ThreadIdType threadID) const
virtual ~ImageToImageMetric ()
- Protected Member Functions inherited from itk::SingleValuedCostFunction
 SingleValuedCostFunction ()
virtual ~SingleValuedCostFunction ()
- Protected Member Functions inherited from itk::CostFunction
 CostFunction ()
virtual ~CostFunction ()
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Protected Attributes

HistogramSizeType m_HistogramSize
MeasurementVectorType m_LowerBound
bool m_LowerBoundSetByUser
MeasurementVectorType m_UpperBound
double m_UpperBoundIncreaseFactor
bool m_UpperBoundSetByUser
- Protected Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
BSplineInterpolatorType::Pointer m_BSplineInterpolator
BSplineParametersOffsetType m_BSplineParametersOffset
MovingImagePointArrayType m_BSplinePreTransformPointsArray
BSplineTransformType::Pointer m_BSplineTransform
BSplineTransformIndexArrayType m_BSplineTransformIndices
BSplineTransformIndicesArrayType m_BSplineTransformIndicesArray
BSplineTransformWeightsType m_BSplineTransformWeights
BSplineTransformWeightsArrayType m_BSplineTransformWeightsArray
bool m_ComputeGradient
DerivativeFunctionType::Pointer m_DerivativeCalculator
FixedImageConstPointer m_FixedImage
FixedImageIndexContainer m_FixedImageIndexes
FixedImageMaskConstPointer m_FixedImageMask
FixedImageSampleContainer m_FixedImageSamples
FixedImagePixelType m_FixedImageSamplesIntensityThreshold
GradientImagePointer m_GradientImage
InterpolatorPointer m_Interpolator
bool m_InterpolatorIsBSpline
MovingImageConstPointer m_MovingImage
MovingImageMaskConstPointer m_MovingImageMask
SizeValueType m_NumberOfFixedImageSamples
SizeValueType m_NumberOfParameters
SizeValueType m_NumberOfPixelsCounted
ThreadIdType m_NumberOfThreads
SizeValueType m_NumBSplineWeights
int m_RandomSeed
bool m_ReseedIterator
MultiThreaderType::Pointer m_Threader
BSplineTransformIndexArrayTypem_ThreaderBSplineTransformIndices
BSplineTransformWeightsTypem_ThreaderBSplineTransformWeights
unsigned int * m_ThreaderNumberOfMovingImageSamples
MultiThreaderParameterType m_ThreaderParameter
TransformPointerm_ThreaderTransform
TransformPointer m_Transform
bool m_TransformIsBSpline
bool m_UseAllPixels
bool m_UseCachingOfBSplineWeights
bool m_UseFixedImageIndexes
bool m_UseFixedImageSamplesIntensityThreshold
bool m_UseSequentialSampling
BooleanArrayType m_WithinBSplineSupportRegionArray
bool m_WithinThreadPostProcess
bool m_WithinThreadPreProcess

Private Member Functions

 HistogramImageToImageMetric (const Self &)
void operator= (const Self &)

Private Attributes

double m_DerivativeStepLength
ScalesType m_DerivativeStepLengthScales
HistogramPointer m_Histogram
FixedImagePixelType m_PaddingValue
bool m_UsePaddingValue

Additional Inherited Members

- Static Public Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
static const unsigned int MovingImageDimension = TMovingImage::ImageDimension
static const unsigned int FixedImageDimension = TFixedImage::ImageDimension
- Protected Types inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
typedef std::vector< bool > BooleanArrayType
typedef
BSplineInterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType
BSplineInterpolatorType
typedef FixedArray
< SizeValueType,::itk::GetImageDimension
< FixedImageType >
::ImageDimension > 
BSplineParametersOffsetType
typedef
BSplineTransformType::ParameterIndexArrayType 
BSplineTransformIndexArrayType
typedef Array2D< IndexValueTypeBSplineTransformIndicesArrayType
typedef BSplineBaseTransform
< CoordinateRepresentationType,::itk::GetImageDimension
< FixedImageType >
::ImageDimension,
itkGetStaticConstMacro(DeformationSplineOrder) > 
BSplineTransformType
typedef Array2D< WeightsValueTypeBSplineTransformWeightsArrayType
typedef
BSplineTransformType::WeightsType 
BSplineTransformWeightsType
typedef
CentralDifferenceImageFunction
< MovingImageType,
CoordinateRepresentationType
DerivativeFunctionType
typedef std::vector
< FixedImageSamplePoint
FixedImageSampleContainer
typedef CovariantVector
< double,
itkGetStaticConstMacro(MovingImageDimension) > 
ImageDerivativesType
typedef
BSplineTransformIndexArrayType::ValueType 
IndexValueType
typedef std::vector
< MovingImagePointType
MovingImagePointArrayType
typedef
BSplineTransformWeightsType::ValueType 
WeightsValueType
- Static Protected Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
static ITK_THREAD_RETURN_TYPE GetValueAndDerivativeMultiThreaded (void *arg)
static ITK_THREAD_RETURN_TYPE GetValueAndDerivativeMultiThreadedPostProcess (void *arg)
static ITK_THREAD_RETURN_TYPE GetValueAndDerivativeMultiThreadedPreProcess (void *arg)
static ITK_THREAD_RETURN_TYPE GetValueMultiThreaded (void *arg)
static ITK_THREAD_RETURN_TYPE GetValueMultiThreadedPostProcess (void *arg)
static ITK_THREAD_RETURN_TYPE GetValueMultiThreadedPreProcess (void *arg)
- Static Protected Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
static const unsigned int DeformationSplineOrder = 3

Detailed Description

template<class TFixedImage, class TMovingImage>
class itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >

Computes similarity between two objects to be registered.

This class is templated over the type of the fixed and moving images to be compared.

The metric computes the similarity measure between pixels in the moving image and pixels in the fixed image using a histogram.

Definition at line 39 of file itkHistogramImageToImageMetric.h.


Member Typedef Documentation

template<class TFixedImage , class TMovingImage >
typedef SmartPointer< const Self > itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::DerivativeType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType
template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageConstPointer itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointerType

Definition at line 68 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageType::PixelType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImagePixelType
template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType
template<class TFixedImage , class TMovingImage >
typedef Superclass::GradientPixelType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType
template<class TFixedImage , class TMovingImage >
typedef HistogramType::Pointer itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramPointer

Definition at line 79 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::SizeType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramSizeType
template<class TFixedImage , class TMovingImage >
typedef Statistics::Histogram< double > itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramType
template<class TFixedImage , class TMovingImage >
typedef Superclass::InputPointType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::InputPointType
template<class TFixedImage , class TMovingImage >
typedef HistogramType::MeasurementVectorType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::MeasurementVectorType

Definition at line 77 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MeasureType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::MeasureType
template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageConstPointer itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointerType

Definition at line 70 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageType::PixelType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImagePixelType
template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType
template<class TFixedImage , class TMovingImage >
typedef Superclass::OutputPointType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::OutputPointType
template<class TFixedImage , class TMovingImage >
typedef SmartPointer< Self > itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::Pointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::RealType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::RealType
template<class TFixedImage , class TMovingImage >
typedef Array< double > itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::ScalesType

The scales type.

Definition at line 124 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramImageToImageMetric itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::Self
template<class TFixedImage , class TMovingImage >
typedef ImageToImageMetric< TFixedImage, TMovingImage > itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::Superclass
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformJacobianType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformParametersType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformPointer itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformType

Constructor & Destructor Documentation

template<class TFixedImage , class TMovingImage >
itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramImageToImageMetric ( )
protected

Constructor is protected to ensure that New() function is used to create instances.

template<class TFixedImage , class TMovingImage >
virtual itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::~HistogramImageToImageMetric ( )
inlineprotectedvirtual

Definition at line 161 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramImageToImageMetric ( const Self )
private

Member Function Documentation

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::ComputeHistogram ( const TransformParametersType parameters,
HistogramType histogram 
) const
protected

Computes the joint histogram from the transformation parameters passed to the function.

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::ComputeHistogram ( const TransformParametersType parameters,
unsigned int  parameter,
double  step,
HistogramType histogram 
) const
protected

Computes the joint histogram from the transformation parameters passed to the function.

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::CopyHistogram ( HistogramType target,
HistogramType source 
) const
protected

Copies a histogram.

template<class TFixedImage , class TMovingImage >
virtual MeasureType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::EvaluateMeasure ( HistogramType histogram) const
protectedpure virtual
template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetDerivative ( const TransformParametersType parameters,
DerivativeType derivative 
) const

Get the derivatives of the match measure.

template<class TFixedImage , class TMovingImage >
virtual double itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetDerivativeStepLength ( ) const
virtual

Returns the step length used to calculate the derivative.

template<class TFixedImage , class TMovingImage >
virtual const ScalesType& itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetDerivativeStepLengthScales ( )
virtual

Returns the derivate step length scales.

template<class TFixedImage , class TMovingImage >
virtual const HistogramPointer& itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetHistogram ( )
virtual

Return the joint histogram. This is updated during every call to the GetValue() method. The histogram can for instance be used by itk::HistogramToImageFilter to plot the joint histogram.

template<class TFixedImage , class TMovingImage >
virtual const HistogramSizeType& itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetHistogramSize ( )
virtual

Gets the histogram size.

template<class TFixedImage , class TMovingImage >
virtual const char* itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetNameOfClass ( ) const
virtual
template<class TFixedImage , class TMovingImage >
virtual const FixedImagePixelType& itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetPaddingValue ( )
virtual

Returns the padding value.

template<class TFixedImage , class TMovingImage >
virtual double itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetUpperBoundIncreaseFactor ( ) const
virtual

Factor to increase the upper bound for the samples in the histogram. Default value is 0.001

template<class TFixedImage , class TMovingImage >
virtual bool itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetUsePaddingValue ( ) const
virtual

Set whether the padding value should be used to determine which pixels should be ignored when calculating the similarity measure. Those pixels in the fixed image which have the padding value will be ignored.

template<class TFixedImage , class TMovingImage >
MeasureType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetValue ( const TransformParametersType parameters) const

Get the value for single valued optimizers.

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivative ( const TransformParametersType parameters,
MeasureType Value,
DerivativeType Derivative 
) const

Get value and derivatives for multiple valued optimizers.

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::Initialize ( ) throw ( ExceptionObject )
virtual
template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::operator= ( const Self )
private
template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual
template<class TFixedImage , class TMovingImage >
virtual void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetDerivativeStepLength ( double  _arg)
virtual

Sets the step length used to calculate the derivative.

template<class TFixedImage , class TMovingImage >
virtual void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetDerivativeStepLengthScales ( ScalesType  _arg)
virtual

Sets the derivative step length scales.

template<class TFixedImage , class TMovingImage >
virtual void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetHistogramSize ( HistogramSizeType  _arg)
virtual

Sets the histogram size. Note this function must be called before Initialize().

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetLowerBound ( const MeasurementVectorType bound)

Set the lower bounds of the intensities to be considered for computing the histogram. This option allows to focus the computation of the Metric in a particular range of intensities that correspond to features of interest.

template<class TFixedImage , class TMovingImage >
virtual void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetPaddingValue ( FixedImagePixelType  _arg)
virtual

The padding value.

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetTransform ( TransformType transform)

Define the transform and thereby the parameter space of the metric and the space of its derivatives

template<class TFixedImage , class TMovingImage >
void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetUpperBound ( const MeasurementVectorType bound)

Set the upper bounds of the intensities to be considered for computing the histogram. This option allows to focus the computation of the Metric in a particular range of intensities that correspond to features of interest.

template<class TFixedImage , class TMovingImage >
virtual void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetUpperBoundIncreaseFactor ( double  _arg)
virtual

Factor to increase the upper bound for the samples in the histogram. Default value is 0.001

template<class TFixedImage , class TMovingImage >
virtual void itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::SetUsePaddingValue ( bool  _arg)
virtual

Set whether the padding value should be used to determine which pixels should be ignored when calculating the similarity measure. Those pixels in the fixed image which have the padding value will be ignored.


Member Data Documentation

template<class TFixedImage , class TMovingImage >
double itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_DerivativeStepLength
private

The step length used to calculate the derivative.

Definition at line 218 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
ScalesType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_DerivativeStepLengthScales
private

The derivative step length scales.

Definition at line 221 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
HistogramPointer itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_Histogram
private

Pointer to the joint histogram. This is updated during every call to GetValue()

Definition at line 225 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
HistogramSizeType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_HistogramSize
protected

The histogram size.

Definition at line 164 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
MeasurementVectorType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_LowerBound
mutableprotected

The lower bound for samples in the histogram.

Definition at line 167 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
bool itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_LowerBoundSetByUser
protected

Boolean flag to indicate whether the user supplied lower bounds or whether they should be computed from the min of image intensities

Definition at line 177 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
FixedImagePixelType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_PaddingValue
private

The padding value.

Definition at line 210 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
MeasurementVectorType itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_UpperBound
mutableprotected

The upper bound for samples in the histogram.

Definition at line 170 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
double itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_UpperBoundIncreaseFactor
protected

The increase in the upper bound.

Definition at line 173 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
bool itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_UpperBoundSetByUser
protected

Boolean flag to indicate whether the user supplied upper bounds or whether they should be computed from the max of image intensities

Definition at line 181 of file itkHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
bool itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >::m_UsePaddingValue
private

True if those pixels in the fixed image with the same value as the padding value should be ignored when calculating the similarity measure.

Definition at line 215 of file itkHistogramImageToImageMetric.h.


The documentation for this class was generated from the following file: