ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Member Functions
itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage > Class Template Reference

#include <itkMeanSquaresHistogramImageToImageMetric.h>

+ Inheritance diagram for itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >:
+ Collaboration diagram for itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >:

List of all members.

Public Types

typedef SmartPointer< const SelfConstPointer
typedef Superclass::DerivativeType DerivativeType
typedef
Superclass::FixedImageConstPointer 
FixedImageConstPointer
typedef Superclass::FixedImageType FixedImageType
typedef
Superclass::GradientPixelType 
GradientPixelType
typedef
HistogramType::AbsoluteFrequencyType 
HistogramFrequencyType
typedef HistogramType::Iterator HistogramIteratorType
typedef
HistogramType::MeasurementVectorType 
HistogramMeasurementVectorType
typedef Superclass::HistogramType HistogramType
typedef Superclass::MeasureType MeasureType
typedef
Superclass::MovingImageConstPointer 
MovingImageConstPointer
typedef Superclass::MovingImageType MovingImageType
typedef SmartPointer< SelfPointer
typedef Superclass::RealType RealType
typedef
MeanSquaresHistogramImageToImageMetric 
Self
typedef
HistogramImageToImageMetric
< TFixedImage, TMovingImage > 
Superclass
typedef
Superclass::TransformJacobianType 
TransformJacobianType
typedef
Superclass::TransformParametersType 
TransformParametersType
typedef
Superclass::TransformPointer 
TransformPointer
typedef Superclass::TransformType TransformType
- Public Types inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
typedef
Superclass::FixedImageConstPointer 
FixedImageConstPointerType
typedef
Superclass::FixedImageType::PixelType 
FixedImagePixelType
typedef HistogramType::Pointer HistogramPointer
typedef HistogramType::SizeType HistogramSizeType
typedef Superclass::InputPointType InputPointType
typedef
HistogramType::MeasurementVectorType 
MeasurementVectorType
typedef
Superclass::MovingImageConstPointer 
MovingImageConstPointerType
typedef
Superclass::MovingImageType::PixelType 
MovingImagePixelType
typedef Superclass::OutputPointType OutputPointType
typedef Array< double > ScalesType
- Public Types inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
typedef
Superclass::ParametersValueType 
CoordinateRepresentationType
typedef std::vector
< FixedImageIndexType
FixedImageIndexContainer
typedef FixedImageType::IndexType FixedImageIndexType
typedef
FixedImageIndexType::IndexValueType 
FixedImageIndexValueType
typedef
FixedImageMaskType::ConstPointer 
FixedImageMaskConstPointer
typedef FixedImageMaskType::Pointer FixedImageMaskPointer
typedef SpatialObject
< itkGetStaticConstMacro(FixedImageDimension) > 
FixedImageMaskType
typedef
TransformType::InputPointType 
FixedImagePointType
typedef FixedImageType::RegionType FixedImageRegionType
typedef InterpolatorType::Pointer InterpolatorPointer
typedef
InterpolateImageFunction
< MovingImageType,
CoordinateRepresentationType
InterpolatorType
typedef MovingImageType::IndexType MovingImageIndexType
typedef
MovingImageMaskType::ConstPointer 
MovingImageMaskConstPointer
typedef
MovingImageMaskType::Pointer 
MovingImageMaskPointer
typedef SpatialObject
< itkGetStaticConstMacro(MovingImageDimension) > 
MovingImageMaskType
typedef
TransformType::OutputPointType 
MovingImagePointType
typedef MultiThreader MultiThreaderType
typedef Superclass::ParametersType ParametersType
typedef Image
< GradientPixelType,
itkGetStaticConstMacro(MovingImageDimension) > 
GradientImageType
typedef SmartPointer
< GradientImageType
GradientImagePointer
typedef
GradientRecursiveGaussianImageFilter
< MovingImageType,
GradientImageType
GradientImageFilterType
typedef
GradientImageFilterType::Pointer 
GradientImageFilterPointer
- Public Types inherited from itk::SingleValuedCostFunction
typedef
Superclass::ParametersValueType 
ParametersValueType
- Public Types inherited from itk::CostFunction
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual const char * GetNameOfClass () const
- Public Member Functions inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
void GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const
virtual double GetDerivativeStepLength () const
virtual const ScalesTypeGetDerivativeStepLengthScales ()
virtual const HistogramPointerGetHistogram ()
virtual const HistogramSizeTypeGetHistogramSize ()
virtual const FixedImagePixelTypeGetPaddingValue ()
MeasureType GetValue (const TransformParametersType &parameters) const
void GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const
void Initialize () throw ( ExceptionObject )
virtual void SetDerivativeStepLength (double _arg)
virtual void SetDerivativeStepLengthScales (ScalesType _arg)
virtual void SetHistogramSize (HistogramSizeType _arg)
void SetLowerBound (const MeasurementVectorType &bound)
virtual void SetPaddingValue (FixedImagePixelType _arg)
void SetTransform (TransformType *transform)
void SetUpperBound (const MeasurementVectorType &bound)
virtual void SetUpperBoundIncreaseFactor (double _arg)
virtual double GetUpperBoundIncreaseFactor () const
virtual void SetUsePaddingValue (bool _arg)
virtual bool GetUsePaddingValue () const
- Public Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void ComputeGradient (void)
virtual const FixedImageTypeGetFixedImage ()
virtual const
FixedImageRegionType
GetFixedImageRegion ()
virtual const FixedImagePixelTypeGetFixedImageSamplesIntensityThreshold ()
virtual const GradientImageTypeGetGradientImage ()
virtual const InterpolatorTypeGetInterpolator ()
virtual const MovingImageTypeGetMovingImage ()
SizeValueType GetNumberOfMovingImageSamples (void)
unsigned int GetNumberOfParameters (void) const
virtual const SizeValueTypeGetNumberOfPixelsCounted ()
SizeValueType GetNumberOfSpatialSamples (void)
virtual const TransformTypeGetTransform ()
virtual const bool & GetUseAllPixels ()
virtual const bool & GetUseFixedImageIndexes ()
virtual const bool & GetUseFixedImageSamplesIntensityThreshold ()
virtual const bool & GetUseSequentialSampling ()
virtual void MultiThreadingInitialize (void) throw ( ExceptionObject )
virtual void SetFixedImage (const FixedImageType *_arg)
void SetFixedImageIndexes (const FixedImageIndexContainer &indexes)
void SetFixedImageRegion (const FixedImageRegionType reg)
void SetFixedImageSamplesIntensityThreshold (const FixedImagePixelType &thresh)
virtual void SetInterpolator (InterpolatorType *_arg)
virtual void SetMovingImage (const MovingImageType *_arg)
void SetNumberOfSpatialSamples (SizeValueType num)
virtual void SetTransform (TransformType *_arg)
void SetTransformParameters (const ParametersType &parameters) const
void SetUseAllPixels (bool useAllPixels)
void SetUseFixedImageIndexes (bool useIndex)
void SetUseFixedImageSamplesIntensityThreshold (bool useThresh)
void SetUseSequentialSampling (bool sequentialSampling)
void UseAllPixelsOff (void)
void UseAllPixelsOn (void)
virtual void SetMovingImageMask (MovingImageMaskType *_arg)
virtual void SetMovingImageMask (const MovingImageMaskType *_arg)
virtual const MovingImageMaskTypeGetMovingImageMask ()
virtual void SetFixedImageMask (FixedImageMaskType *_arg)
virtual void SetFixedImageMask (const FixedImageMaskType *_arg)
virtual const FixedImageMaskTypeGetFixedImageMask ()
void SetNumberOfThreads (ThreadIdType numberOfThreads)
virtual const ThreadIdTypeGetNumberOfThreads ()
virtual void SetComputeGradient (bool _arg)
virtual const bool & GetComputeGradient ()
virtual void ComputeGradientOn ()
virtual void ComputeGradientOff ()
virtual void SetNumberOfFixedImageSamples (SizeValueType numSamples)
virtual const SizeValueTypeGetNumberOfFixedImageSamples ()
void ReinitializeSeed ()
void ReinitializeSeed (int seed)
virtual void SetUseCachingOfBSplineWeights (bool _arg)
virtual const bool & GetUseCachingOfBSplineWeights ()
virtual void UseCachingOfBSplineWeightsOn ()
virtual void UseCachingOfBSplineWeightsOff ()
virtual const MultiThreaderTypeGetThreader ()
const TransformPointerGetThreaderTransform ()
- Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const =0
virtual MeasureType GetValue (const ParametersType &parameters) const =0
virtual void GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Static Public Member Functions

static Pointer New ()

Protected Member Functions

virtual MeasureType EvaluateMeasure (HistogramType &histogram) const
 MeanSquaresHistogramImageToImageMetric ()
virtual ~MeanSquaresHistogramImageToImageMetric ()
- Protected Member Functions inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
void ComputeHistogram (const TransformParametersType &parameters, HistogramType &histogram) const
void ComputeHistogram (const TransformParametersType &parameters, unsigned int parameter, double step, HistogramType &histogram) const
void CopyHistogram (HistogramType &target, HistogramType &source) const
 HistogramImageToImageMetric ()
void PrintSelf (std::ostream &os, Indent indent) const
virtual ~HistogramImageToImageMetric ()
- Protected Member Functions inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
virtual void ComputeImageDerivatives (const MovingImagePointType &mappedPoint, ImageDerivativesType &gradient, ThreadIdType threadID) const
void GetValueAndDerivativeMultiThreadedInitiate (void) const
void GetValueAndDerivativeMultiThreadedPostProcessInitiate (void) const
void GetValueAndDerivativeMultiThreadedPreProcessInitiate (void) const
virtual void GetValueAndDerivativeThread (ThreadIdType threadID) const
virtual void GetValueAndDerivativeThreadPostProcess (ThreadIdType, bool) const
virtual void GetValueAndDerivativeThreadPreProcess (ThreadIdType, bool) const
virtual bool GetValueAndDerivativeThreadProcessSample (ThreadIdType, SizeValueType, const MovingImagePointType &, double, const ImageDerivativesType &) const
void GetValueMultiThreadedInitiate (void) const
void GetValueMultiThreadedPostProcessInitiate (void) const
void GetValueMultiThreadedPreProcessInitiate (void) const
virtual void GetValueThread (ThreadIdType threadID) const
virtual void GetValueThreadPostProcess (ThreadIdType, bool) const
virtual void GetValueThreadPreProcess (ThreadIdType, bool) const
virtual bool GetValueThreadProcessSample (ThreadIdType, SizeValueType, const MovingImagePointType &, double) const
 ImageToImageMetric ()
virtual void PreComputeTransformValues (void)
virtual void SampleFixedImageIndexes (FixedImageSampleContainer &samples) const
virtual void SampleFixedImageRegion (FixedImageSampleContainer &samples) const
virtual void SampleFullFixedImageRegion (FixedImageSampleContainer &samples) const
virtual void SynchronizeTransforms () const
virtual void TransformPoint (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ThreadIdType threadID) const
virtual void TransformPointWithDerivatives (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ImageDerivativesType &gradient, ThreadIdType threadID) const
virtual ~ImageToImageMetric ()
- Protected Member Functions inherited from itk::SingleValuedCostFunction
 SingleValuedCostFunction ()
virtual ~SingleValuedCostFunction ()
- Protected Member Functions inherited from itk::CostFunction
 CostFunction ()
virtual ~CostFunction ()
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Private Member Functions

 MeanSquaresHistogramImageToImageMetric (Self const &)
void operator= (Self const &)

Additional Inherited Members

- Protected Attributes inherited from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >
HistogramSizeType m_HistogramSize
MeasurementVectorType m_LowerBound
bool m_LowerBoundSetByUser
MeasurementVectorType m_UpperBound
double m_UpperBoundIncreaseFactor
bool m_UpperBoundSetByUser
- Protected Attributes inherited from itk::ImageToImageMetric< TFixedImage, TMovingImage >
BSplineInterpolatorType::Pointer m_BSplineInterpolator
BSplineParametersOffsetType m_BSplineParametersOffset
MovingImagePointArrayType m_BSplinePreTransformPointsArray
BSplineTransformType::Pointer m_BSplineTransform
BSplineTransformIndexArrayType m_BSplineTransformIndices
BSplineTransformIndicesArrayType m_BSplineTransformIndicesArray
BSplineTransformWeightsType m_BSplineTransformWeights
BSplineTransformWeightsArrayType m_BSplineTransformWeightsArray
bool m_ComputeGradient
DerivativeFunctionType::Pointer m_DerivativeCalculator
FixedImageConstPointer m_FixedImage
FixedImageIndexContainer m_FixedImageIndexes
FixedImageMaskConstPointer m_FixedImageMask
FixedImageSampleContainer m_FixedImageSamples
FixedImagePixelType m_FixedImageSamplesIntensityThreshold
GradientImagePointer m_GradientImage
InterpolatorPointer m_Interpolator
bool m_InterpolatorIsBSpline
MovingImageConstPointer m_MovingImage
MovingImageMaskConstPointer m_MovingImageMask
SizeValueType m_NumberOfFixedImageSamples
SizeValueType m_NumberOfParameters
SizeValueType m_NumberOfPixelsCounted
ThreadIdType m_NumberOfThreads
SizeValueType m_NumBSplineWeights
int m_RandomSeed
bool m_ReseedIterator
MultiThreaderType::Pointer m_Threader
BSplineTransformIndexArrayTypem_ThreaderBSplineTransformIndices
BSplineTransformWeightsTypem_ThreaderBSplineTransformWeights
unsigned int * m_ThreaderNumberOfMovingImageSamples
MultiThreaderParameterType m_ThreaderParameter
TransformPointerm_ThreaderTransform
TransformPointer m_Transform
bool m_TransformIsBSpline
bool m_UseAllPixels
bool m_UseCachingOfBSplineWeights
bool m_UseFixedImageIndexes
bool m_UseFixedImageSamplesIntensityThreshold
bool m_UseSequentialSampling
BooleanArrayType m_WithinBSplineSupportRegionArray
bool m_WithinThreadPostProcess
bool m_WithinThreadPreProcess

Detailed Description

template<class TFixedImage, class TMovingImage>
class itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >

Computes mean squared difference similarity measure between two images to be registered.

This class is templated over the type of the fixed and moving images to be compared.

This metric computes the similarity measure between pixels in the moving image and pixels in the fixed images using a histogram.

Definition at line 39 of file itkMeanSquaresHistogramImageToImageMetric.h.


Member Typedef Documentation

template<class TFixedImage , class TMovingImage >
typedef SmartPointer< const Self > itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::DerivativeType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType

Type of the derivative.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 65 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageConstPointer itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::FixedImageType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType
template<class TFixedImage , class TMovingImage >
typedef Superclass::GradientPixelType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType

Gaussian filter to compute the gradient of the Moving Image

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 62 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::AbsoluteFrequencyType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramFrequencyType

Definition at line 72 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::Iterator itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramIteratorType

Definition at line 73 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramType::MeasurementVectorType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramMeasurementVectorType

Definition at line 74 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::HistogramType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::HistogramType

Typedefs for histogram. This should have been defined as Histogram<RealType,2> but a bug in VC++7 produced an internal compiler error with such declaration.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 71 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MeasureType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::MeasureType

Type of the measure.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 64 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageConstPointer itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::MovingImageType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType
template<class TFixedImage , class TMovingImage >
typedef SmartPointer< Self > itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::Pointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::RealType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::RealType

Types transferred from the base class

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 54 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef MeanSquaresHistogramImageToImageMetric itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::Self

Standard class typedefs.

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

Definition at line 44 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
typedef HistogramImageToImageMetric< TFixedImage, TMovingImage > itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::Superclass
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformJacobianType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformParametersType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformPointer itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer
template<class TFixedImage , class TMovingImage >
typedef Superclass::TransformType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::TransformType

Constructor & Destructor Documentation

template<class TFixedImage , class TMovingImage >
itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::MeanSquaresHistogramImageToImageMetric ( )
inlineprotected

Constructor is protected to ensure that New() function is used to create instances.

Definition at line 78 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
virtual itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::~MeanSquaresHistogramImageToImageMetric ( )
inlineprotectedvirtual

Constructor is protected to ensure that New() function is used to create instances.

Definition at line 79 of file itkMeanSquaresHistogramImageToImageMetric.h.

template<class TFixedImage , class TMovingImage >
itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::MeanSquaresHistogramImageToImageMetric ( Self const &  )
private

Member Function Documentation

template<class TFixedImage , class TMovingImage >
virtual::itk::LightObject::Pointer itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TFixedImage , class TMovingImage >
virtual MeasureType itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::EvaluateMeasure ( HistogramType histogram) const
protectedvirtual

Evaluates the sum of squared differences from the histogram.

Implements itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
virtual const char* itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.

template<class TFixedImage , class TMovingImage >
static Pointer itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::New ( )
static

Method for creation through the object factory.

Reimplemented from itk::Object.

template<class TFixedImage , class TMovingImage >
void itk::MeanSquaresHistogramImageToImageMetric< TFixedImage, TMovingImage >::operator= ( Self const &  )
private

Mutex lock to protect modification to the reference count

Reimplemented from itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.


The documentation for this class was generated from the following file: