ITK  4.3.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes | Private Member Functions | Private Attributes | List of all members
itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell > Class Template Referenceabstract

#include <itkMultiphaseFiniteDifferenceImageFilter.h>

+ Inheritance diagram for itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >:
+ Collaboration diagram for itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >:

Detailed Description

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
class itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >

The Finite Difference Solver Hierarchy

This is an alternate version of the ITK finite difference solver (FDS) framework, supporting the solution of multiple functions, simultaneously. The FDS framework is a set of classes for creating filters to solve partial differential equations on images using an iterative, finite difference update scheme.

The high-level algorithm implemented by the framework can be described by the following pseudocode.
WHILE NOT convergence:
FOR ALL pixels i
FOR ALL functions f
min_time_step = min(min_time_step, calculate_change(f, i))
FOR ALL functions f
update(f, i, time_step)
The following equation describes update $n+1$ at pixel $i$ on discrete image $ u $ :
$u_{\mathbf{i}}^{n+1}=u^n_{\mathbf{i}}+\Delta u^n_{\mathbf{i}}\Delta t$
Component objects
The FDS hierarchy is comprised of two component object types, variations of which are designed to be plugged together to create filters for different applications. At the process level are the ``solver'' objects, which are subclasses of MultiphaseFiniteDifferenceImageFilter. Solver objects are filters that take image inputs and produce image outputs. Solver objects require a ``finite difference function'' object to perform the calculation at each image pixel during iteration. These specialized function objects are subclasses of FiniteDifferenceFunction. FiniteDifferenceFunctions take a neighborhood of pixels as input (in the form of an itk::NeighborhoodIterator) and produce a scalar valued result.
Filters for different applications are created by defining a function object to handle the numerical calculations and choosing (or creating) a solver object that reflects the requirements and constraints of the application. For example, anisotropic diffusion filters are created by plugging anisotropic diffusion functions into the DenseFiniteDifferenceImageFilter2. The separation between function object and solver object allows us to create, for example, sparse-field, dense-field, and narrow-band implementations of a level-set surface evolution filter can all be constructed by plugging the same function object into three different, specialized solvers.
Creating new filters in this hierarchy
The procedure for creating a filter within the FDS hierarchy is to identify all the virtual methods that need to be defined for your particular application. In the simplest case, a filter needs only to instantiate a specific function object and define some halting criteria. For more complicated applications, you may need to define a specialized type of iteration scheme or updating procedure in a higher-level solver object.
Some simple examples are the specific subclasses of AnisotropicDiffusionImageFilter. The leaves of the anisotropic diffusion filter tree only define the function object they use for their particular flavor of diffusion. See CurvatureAnisotropicDiffusionImageFilter and GradientAnisotropicDiffusionImageFilter for details.
FiniteDifferenceImageFilter2
This class defines the generic solver API at the top level of the FDS framework. FiniteDifferenceImageFilter2 is an abstract class that implements the generic, high-level algorithm (described above).
Inputs and Outputs
This filter is an Image to Image filter. Depending on the specific subclass implementation, finite difference image filters may process a variety of image types. The input to the filter is the initial value of $ u $ and the output of the filter is the solution to the p.d.e.
How to use this class
GenerateData() relies on several virtual methods that must be defined by a subclass. Specifically: AllocateUpdateBuffer ApplyUpdate CalculateChange and Halt. To create a finite difference solver, implement a subclass to define these methods.
Note that there is no fixed container type for the buffer used to hold the update $ \Delta $. The container might be another image, or simply a list of values. AllocateUpdateBuffer is responsible for creating the $ \Delta $ container. CalculateChange populates this buffer and ApplyUpdate adds the buffer values to the output image (solution). The boolean Halt() (or ThreadedHalt) method returns a true value to stop iteration.

Based on the paper:

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.
Author
Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper:

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
http://www.insight-journal.org/browse/publication/642
http://hdl.handle.net/10380/3055

That is based on the papers:

"Level Set Segmentation: Active Contours without edge"
http://www.insight-journal.org/browse/publication/322
http://hdl.handle.net/1926/1532

and

"Level set segmentation using coupled active surfaces"
http://www.insight-journal.org/browse/publication/323
http://hdl.handle.net/1926/1533
See Also
DenseFiniteDifferenceImageFilter2

Definition at line 165 of file itkMultiphaseFiniteDifferenceImageFilter.h.

Public Types

typedef Vector< float,
itkGetStaticConstMacro(ImageDimension) > 
CentroidVectorType
 
typedef SmartPointer< const SelfConstPointer
 
typedef FeatureImageType::Pointer FeatureImagePointer
 
typedef TFeatureImage FeatureImageType
 
typedef FeatureImageType::PixelType FeaturePixelType
 
typedef FeatureImageType::PointType FeaturePointType
 
typedef
FeatureImageType::RegionType 
FeatureRegionType
 
typedef FeatureImageType::SizeType FeatureSizeType
 
typedef
FeatureImageType::SpacingType 
FeatureSpacingType
 
typedef
FiniteDifferenceFunctionType::Pointer 
FiniteDifferenceFunctionPointer
 
typedef TFiniteDifferenceFunction FiniteDifferenceFunctionType
 
typedef TIdCell IdCellType
 
typedef
InputPointType::CoordRepType 
InputCoordRepType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef TInputImage InputImageType
 
typedef InputImageType::IndexType InputIndexType
 
typedef
InputIndexType::IndexValueType 
InputIndexValueType
 
typedef
InputImageType::OffsetValueType 
InputOffsetValueType
 
typedef InputImageType::PixelType InputPixelType
 
typedef InputImageType::PointType InputPointType
 
typedef InputImageType::RegionType InputRegionType
 
typedef InputImageType::SizeType InputSizeType
 
typedef
InputSizeType::SizeValueType 
InputSizeValueType
 
typedef InputImageType::SpacingType InputSpacingType
 
typedef
KdTreeGeneratorType::Pointer 
KdTreeGeneratorPointer
 
typedef
Statistics::KdTreeGenerator
< SampleType
KdTreeGeneratorType
 
typedef KdTreeType::Pointer KdTreePointer
 
typedef
KdTreeGeneratorType::KdTreeType 
KdTreeType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef TOutputImage OutputImageType
 
typedef OutputImageType::IndexType OutputIndexType
 
typedef
OutputImageType::IndexValueType 
OutputIndexValueType
 
typedef OutputImageType::PixelType OutputPixelType
 
typedef OutputImageType::RegionType OutputRegionType
 
typedef OutputImageType::SizeType OutputSizeType
 
typedef
OutputImageType::SizeValueType 
OutputSizeValueType
 
typedef SmartPointer< SelfPointer
 
typedef
FiniteDifferenceFunctionType::RadiusType 
RadiusType
 
typedef Statistics::ListSample
< CentroidVectorType
SampleType
 
typedef
MultiphaseFiniteDifferenceImageFilter 
Self
 
typedef InPlaceImageFilter
< TFeatureImage, TOutputImage > 
Superclass
 
typedef
FiniteDifferenceFunctionType::TimeStepType 
TimeStepType
 
typedef std::vector< TimeStepTypeTimeStepVectorType
 
typedef std::vector< IdCellTypeVectorIdCellType
 
- Public Types inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TFeatureImage InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImagePointer 
OutputImagePointer
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef InPlaceImageFilter Self
 
typedef ImageToImageFilter
< TFeatureImage, TOutputImage > 
Superclass
 
- Public Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TFeatureImage InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef SmartPointer< SelfPointer
 
typedef ImageToImageFilter Self
 
typedef ImageSource< TOutputImage > Superclass
 
- Public Types inherited from itk::ImageSource< TOutputImage >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef
Superclass::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
 
typedef OutputImageType::PixelType OutputImagePixelType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef OutputImageType::RegionType OutputImageRegionType
 
typedef TOutputImage OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef ImageSource Self
 
typedef ProcessObject Superclass
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const SelfConstPointer
 
typedef
DataObject::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 
DataObjectPointerArraySizeType
 
typedef std::vector
< DataObjectIdentifierType
NameArray
 
typedef SmartPointer< SelfPointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual const unsigned int & GetElapsedIterations ()
 
InputImagePointer GetLevelSet (const IdCellType &i)
 
virtual const char * GetNameOfClass () const
 
virtual void SetElapsedIterations (unsigned int _arg)
 
void SetFunctionCount (const IdCellType &n)
 
void SetKdTree (KdTreeType *kdtree)
 
void SetLevelSet (const IdCellType &i, const InputImageType *levelSet)
 
void SetLookup (VectorIdCellType lookup)
 
virtual const
FiniteDifferenceFunctionPointer 
GetDifferenceFunction (const IdCellType &functionIndex) const
 
virtual void SetDifferenceFunction (const IdCellType &functionIndex, FiniteDifferenceFunctionPointer function)
 
virtual void SetNumberOfIterations (unsigned int _arg)
 
virtual const unsigned int & GetNumberOfIterations ()
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing ()
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError ()
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange ()
 
virtual void SetInitializedState (bool _arg)
 
virtual const bool & GetInitializedState ()
 
virtual void InitializedStateOn ()
 
virtual void InitializedStateOff ()
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization ()
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
virtual bool CanRunInPlace () const
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
virtual double GetCoordinateTolerance ()
 
const InputImageTypeGetInput (void) const
 
const InputImageTypeGetInput (unsigned int idx) const
 
virtual void PopBackInput ()
 
virtual void PopFrontInput ()
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TFeatureImage *image)
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance ()
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
OutputImageTypeGetOutput (void)
 
const OutputImageTypeGetOutput (void) const
 
virtual
ProcessObject::DataObjectPointer 
MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData ()
 
NameArray GetInputNames () const
 
MultiThreader * GetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
virtual const float & GetProgress ()
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void SetProgress (float _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float amount)
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArray GetOutputs ()
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfThreads ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual LightObject::Pointer CreateAnother () const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int)
 
virtual void UnRegister () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Attributes

static const unsigned int ImageDimension = TOutputImage::ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static const unsigned int OutputImageDimension = TOutputImage::ImageDimension
 

Protected Member Functions

virtual void AllocateUpdateBuffer ()=0
 
virtual void ApplyUpdate (TimeStepType dt)=0
 
virtual TimeStepType CalculateChange ()=0
 
virtual void CopyInputToOutput ()=0
 
virtual void GenerateData ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual bool Halt ()
 
virtual void Initialize ()
 
 MultiphaseFiniteDifferenceImageFilter ()
 
virtual void PostProcessOutput ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
TimeStepType ResolveTimeStep (const TimeStepVectorType &timeStepList, const std::vector< bool > &valid)
 
virtual bool ThreadedHalt (void *)
 
 ~MultiphaseFiniteDifferenceImageFilter ()
 
virtual void InitializeIteration ()
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
virtual void AllocateOutputs ()
 
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()
 
virtual void ReleaseInputs ()
 
 ~InPlaceImageFilter ()
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
virtual void VerifyInputInformation ()
 
void PushBackInput (const DataObject *input)
 
void PushFrontInput (const DataObject *input)
 
 ImageToImageFilter ()
 
 ~ImageToImageFilter ()
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual ~ImageSource ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs ()
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject ()
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

std::vector
< FiniteDifferenceFunctionPointer
m_DifferenceFunctions
 
unsigned int m_ElapsedIterations
 
IdCellType m_FunctionCount
 
KdTreePointer m_KdTree
 
std::vector< InputImagePointerm_LevelSet
 
VectorIdCellType m_Lookup
 
double m_MaximumRMSError
 
unsigned int m_NumberOfIterations
 
double m_RMSChange
 
bool m_UseImageSpacing
 

Private Member Functions

 MultiphaseFiniteDifferenceImageFilter (const Self &)
 
void operator= (const Self &)
 

Private Attributes

bool m_InitializedState
 
bool m_ManualReinitialization
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Protected Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(OutputImageDimension),
itkGetStaticConstMacro(InputImageDimension) > 
InputToOutputRegionCopierType
 
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(InputImageDimension),
itkGetStaticConstMacro(OutputImageDimension) > 
OutputToInputRegionCopierType
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static ITK_THREAD_RETURN_TYPE ThreaderCallback (void *arg)
 

Member Typedef Documentation

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef Vector< float, itkGetStaticConstMacro(ImageDimension) > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::CentroidVectorType

Definition at line 226 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef SmartPointer< const Self > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ConstPointer

Definition at line 174 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FeatureImageType::Pointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeatureImagePointer

Definition at line 197 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef TFeatureImage itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeatureImageType

Definition at line 196 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FeatureImageType::PixelType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeaturePixelType

Definition at line 202 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FeatureImageType::PointType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeaturePointType

Definition at line 201 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FeatureImageType::RegionType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeatureRegionType

Definition at line 198 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FeatureImageType::SizeType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeatureSizeType

Definition at line 199 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FeatureImageType::SpacingType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FeatureSpacingType

Definition at line 200 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FiniteDifferenceFunctionType::Pointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FiniteDifferenceFunctionPointer

Definition at line 220 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef TFiniteDifferenceFunction itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::FiniteDifferenceFunctionType

The value type of the time step. This is distinct from PixelType because PixelType may often be a vector value, while the TimeStep is a scalar value.

Definition at line 219 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef TIdCell itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::IdCellType

Definition at line 213 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputPointType::CoordRepType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputCoordRepType

Definition at line 186 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::Pointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputImagePointer

Definition at line 184 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef TInputImage itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputImageType

Input and output image types.

Definition at line 183 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::IndexType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputIndexType

Definition at line 187 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputIndexType::IndexValueType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputIndexValueType

Definition at line 188 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::OffsetValueType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputOffsetValueType

Definition at line 194 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::PixelType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputPixelType

Definition at line 192 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::PointType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputPointType

Definition at line 185 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::RegionType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputRegionType

Definition at line 191 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::SizeType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputSizeType

Definition at line 189 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputSizeType::SizeValueType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputSizeValueType

Definition at line 190 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InputImageType::SpacingType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InputSpacingType

Definition at line 193 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef KdTreeGeneratorType::Pointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::KdTreeGeneratorPointer

Definition at line 229 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef Statistics::KdTreeGenerator< SampleType > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::KdTreeGeneratorType

Definition at line 228 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef KdTreeType::Pointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::KdTreePointer

Definition at line 231 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef KdTreeGeneratorType::KdTreeType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::KdTreeType

Definition at line 230 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::Pointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputImagePointer

Definition at line 205 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef TOutputImage itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputImageType

Definition at line 204 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::IndexType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputIndexType

Definition at line 210 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::IndexValueType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputIndexValueType

Definition at line 211 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::PixelType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputPixelType

Definition at line 206 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::RegionType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputRegionType

Definition at line 207 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::SizeType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputSizeType

Definition at line 208 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef OutputImageType::SizeValueType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::OutputSizeValueType

Definition at line 209 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef SmartPointer< Self > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::Pointer

Definition at line 173 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FiniteDifferenceFunctionType::RadiusType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::RadiusType

Definition at line 223 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef Statistics::ListSample< CentroidVectorType > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SampleType

Definition at line 227 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef MultiphaseFiniteDifferenceImageFilter itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::Self

Standard class typedefs.

Definition at line 171 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef InPlaceImageFilter< TFeatureImage, TOutputImage > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::Superclass

Definition at line 172 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef FiniteDifferenceFunctionType::TimeStepType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::TimeStepType

Definition at line 221 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef std::vector< TimeStepType > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::TimeStepVectorType

Definition at line 222 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
typedef std::vector< IdCellType > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::VectorIdCellType

Definition at line 214 of file itkMultiphaseFiniteDifferenceImageFilter.h.

Constructor & Destructor Documentation

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::MultiphaseFiniteDifferenceImageFilter ( )
inlineprotected

Definition at line 390 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::~MultiphaseFiniteDifferenceImageFilter ( )
inlineprotected

Definition at line 404 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::MultiphaseFiniteDifferenceImageFilter ( const Self )
private

Member Function Documentation

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::AllocateUpdateBuffer ( )
protectedpure virtual
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ApplyUpdate ( TimeStepType  dt)
protectedpure virtual

This method is defined by a subclass to apply changes to the output from an update buffer and a time step value "dt".

Parameters
dtTime step value.
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual TimeStepType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::CalculateChange ( )
protectedpure virtual

This method is defined by a subclass to populate an update buffer with changes for the pixels in the output. It returns a time step value to be used for the update.

Returns
A time step to use in updating the output with the changes calculated from this method.

Implemented in itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >, itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >, and itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::CopyInputToOutput ( )
protectedpure virtual
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GenerateData ( )
protectedvirtual

This is the default, high-level algorithm for calculating finite difference solutions. It calls virtual methods in its subclasses to implement the major steps of the algorithm.

Reimplemented from itk::ImageSource< TOutputImage >.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GenerateInputRequestedRegion ( )
protectedvirtual

FiniteDifferenceImageFilter2 needs a larger input requested region than the output requested region. As such, we need to provide an implementation for GenerateInputRequestedRegion() in order to inform the pipeline execution model.

The filter will ask for a padded region to perform its neighborhood calculations. If no such region is available, the boundaries will be handled as described in the FiniteDifferenceFunction defined by the subclass.
See Also
ProcessObject::GenerateInputRequestedRegion()

Reimplemented from itk::ImageToImageFilter< TFeatureImage, TOutputImage >.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const FiniteDifferenceFunctionPointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetDifferenceFunction ( const IdCellType functionIndex) const
inlinevirtual

This method returns a pointer to a FiniteDifferenceFunction object that will be used by the filter to calculate updates at image pixels.

Parameters
functionIndexIndex of difference function to return.
Returns
A FiniteDifferenceObject pointer.

Definition at line 237 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const unsigned int& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetElapsedIterations ( )
virtual

Get the number of elapsed iterations of the filter.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const bool& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetInitializedState ( )
virtual

Set/Get the state of the filter.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
InputImagePointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetLevelSet ( const IdCellType i)
inline

Definition at line 331 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const bool& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetManualReinitialization ( )
virtual

Require the filter to be manually reinitialized (by calling SetInitializedStateOff()

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const double& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetMaximumRMSError ( )
virtual

Set/Get the maximum error allowed in the solution. This may not be defined for all solvers and its meaning may change with the application.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const char* itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetNameOfClass ( ) const
virtual
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const unsigned int& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetNumberOfIterations ( )
virtual

Set/Get the number of iterations that the filter will run.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const double& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetRMSChange ( )
virtual

Set/Get the root mean squared change of the previous iteration. May not be used by all solvers.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual const bool& itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::GetUseImageSpacing ( )
virtual

Use the image spacing information in calculations. Use this option if you want derivatives in physical space. Default is UseImageSpacingOn.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual bool itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::Halt ( )
protectedvirtual

This method returns true when the current iterative solution of the equation has met the criteria to stop solving. Defined by a subclass.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::Initialize ( void  )
inlineprotectedvirtual
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InitializedStateOff ( )
virtual

Set/Get the state of the filter.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InitializedStateOn ( )
virtual

Set/Get the state of the filter.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::InitializeIteration ( )
inlineprotectedvirtual

This method is optionally defined by a subclass and is called immediately prior to each iterative CalculateChange-ApplyUpdate cycle. It can be used to set global variables needed for the next iteration (ie. average gradient magnitude of the image in anisotropic diffusion functions), or otherwise prepare for the next iteration.

Reimplemented in itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >, itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >, and itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >.

Definition at line 494 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ManualReinitializationOff ( )
virtual

Require the filter to be manually reinitialized (by calling SetInitializedStateOff()

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ManualReinitializationOn ( )
virtual

Require the filter to be manually reinitialized (by calling SetInitializedStateOff()

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::operator= ( const Self )
private
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::PostProcessOutput ( )
inlineprotectedvirtual
template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
TimeStepType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ResolveTimeStep ( const TimeStepVectorType timeStepList,
const std::vector< bool > &  valid 
)
inlineprotected

Virtual method for resolving a single time step from a set of time steps returned from processing threads.

Returns
Time step (dt) for the iteration update based on a list of time steps generated from the threaded calculated change method (one for each region processed).
Parameters
timeStepListThe set of time changes compiled from all the threaded calls to ThreadedGenerateData.
validThe set of flags indicating which of "list" elements are valid

The default is to return the minimum value in the list.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetDifferenceFunction ( const IdCellType functionIndex,
FiniteDifferenceFunctionPointer  function 
)
inlinevirtual

This method sets the pointer to a FiniteDifferenceFunction object that will be used by the filter to calculate updates at image pixels.

Parameters
functionIndexIndex of difference function to set.
functionPointer to difference function to set.

Definition at line 255 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetElapsedIterations ( unsigned int  _arg)
virtual

Set the number of elapsed iterations of the filter.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetFunctionCount ( const IdCellType n)
inline

Definition at line 354 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetInitializedState ( bool  _arg)
virtual

Set/Get the state of the filter.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetKdTree ( KdTreeType kdtree)
inline

Definition at line 349 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetLevelSet ( const IdCellType i,
const InputImageType levelSet 
)
inline

Definition at line 308 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetLookup ( VectorIdCellType  lookup)
inline

Definition at line 344 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetManualReinitialization ( bool  _arg)
virtual

Require the filter to be manually reinitialized (by calling SetInitializedStateOff()

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetMaximumRMSError ( double  _arg)
virtual

Set/Get the maximum error allowed in the solution. This may not be defined for all solvers and its meaning may change with the application.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetNumberOfIterations ( unsigned int  _arg)
virtual

Set/Get the number of iterations that the filter will run.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetRMSChange ( double  _arg)
virtual

Set/Get the root mean squared change of the previous iteration. May not be used by all solvers.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::SetUseImageSpacing ( bool  _arg)
virtual

Use the image spacing information in calculations. Use this option if you want derivatives in physical space. Default is UseImageSpacingOn.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual bool itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ThreadedHalt ( void *  )
inlineprotectedvirtual

This method is similar to Halt(), and its default implementation in this class is simply to call Halt(). However, this method takes as a parameter a void pointer to the MultiThreader::ThreadInfoStruct structure. If you override this method instead of overriding Halt, you will be able to get the current thread ID and handle the Halt method accordingly. This is useful if you are doing a lot of processing in Halt that you don't want parallelized. Notice that ThreadedHalt is only called by the multithreaded filters, so you still should implement Halt, just in case a non-threaded filter is used.

Definition at line 476 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::UseImageSpacingOff ( )
virtual

Use the image spacing information in calculations. Use this option if you want derivatives in physical space. Default is UseImageSpacingOn.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
virtual void itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::UseImageSpacingOn ( )
virtual

Use the image spacing information in calculations. Use this option if you want derivatives in physical space. Default is UseImageSpacingOn.

Member Data Documentation

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
const unsigned int itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::ImageDimension = TOutputImage::ImageDimension
static

Dimensionality of input and output data is assumed to be the same.

Definition at line 180 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
std::vector< FiniteDifferenceFunctionPointer > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_DifferenceFunctions
protected

The function that will be used in calculating updates for each pixel.

Definition at line 417 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
unsigned int itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_ElapsedIterations
protected

Definition at line 411 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
IdCellType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_FunctionCount
protected

Definition at line 406 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
bool itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_InitializedState
private

State that the filter is in, i.e. UNINITIALIZED or INITIALIZED

Definition at line 532 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
KdTreePointer itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_KdTree
protected

Definition at line 409 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
std::vector< InputImagePointer > itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_LevelSet
protected

Definition at line 407 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
VectorIdCellType itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_Lookup
protected

Definition at line 408 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
bool itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_ManualReinitialization
private

Indicates whether the filter automatically resets to UNINITIALIZED state after completing, or whether filter must be manually reset

Definition at line 529 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
double itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_MaximumRMSError
protected

Definition at line 412 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
unsigned int itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_NumberOfIterations
protected

Definition at line 414 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
double itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_RMSChange
protected

Definition at line 413 of file itkMultiphaseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFiniteDifferenceFunction = FiniteDifferenceFunction< TOutputImage >, typename TIdCell = unsigned int>
bool itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFiniteDifferenceFunction, TIdCell >::m_UseImageSpacing
protected

Control whether derivatives use spacing of the input image in its calculation.

Definition at line 421 of file itkMultiphaseFiniteDifferenceImageFilter.h.


The documentation for this class was generated from the following file: