ITK  5.4.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Attributes | List of all members
itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage > Class Template Reference

#include <itkConfidenceConnectedImageFilter.h>

+ Inheritance diagram for itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >:
+ Collaboration diagram for itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using IndexType = typename InputImageType::IndexType
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using InputRealType = typename NumericTraits< InputImagePixelType >::RealType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using SeedsContainerType = std::vector< IndexType >
 
using Self = ConfidenceConnectedImageFilter
 
using SizeType = typename InputImageType::SizeType
 
using Superclass = ImageToImageFilter< TInputImage, TOutputImage >
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TOutputImage >
 
- Public Types inherited from itk::ImageSource< TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

void AddSeed (const IndexType &seed)
 
void ClearSeeds ()
 
virtual const InputRealTypeGetMean () const
 
virtual const char * GetNameOfClass () const
 
virtual const SeedsContainerTypeGetSeeds () const
 
virtual const InputRealTypeGetVariance () const
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
void SetSeed (const IndexType &seed)
 
virtual void SetMultiplier (double _arg)
 
virtual double GetMultiplier () const
 
virtual void SetNumberOfIterations (unsigned int _arg)
 
virtual unsigned int GetNumberOfIterations () const
 
virtual void SetReplaceValue (OutputImagePixelType _arg)
 
virtual OutputImagePixelType GetReplaceValue () const
 
virtual void SetInitialNeighborhoodRadius (unsigned int _arg)
 
virtual const unsigned int & GetInitialNeighborhoodRadius () const
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *input)
 
virtual void PushFrontInput (const InputImageType *input)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *input)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput (unsigned int idx)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *graft)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *graft)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual float GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
void IncrementProgress (float increment)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool val)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
LightObject::Pointer CreateAnother () const override
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static double GetGlobalDefaultCoordinateTolerance ()
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static void SetGlobalDefaultDirectionTolerance (double)
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Member Functions

 ConfidenceConnectedImageFilter ()
 
void EnlargeOutputRequestedRegion (DataObject *output) override
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
 ~ConfidenceConnectedImageFilter () override=default
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
void VerifyInputInformation () ITKv5_CONST override
 
 ~ImageToImageFilter () override=default
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &name, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *object)
 
virtual void SetPrimaryOutput (DataObject *object)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType i)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType i) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual bool GetThreaderUpdateProgress () const
 
virtual void ThreaderUpdateProgressOn ()
 
virtual void SetThreaderUpdateProgress (bool arg)
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Attributes

unsigned int m_InitialNeighborhoodRadius
 
InputRealType m_Mean
 
double m_Multiplier
 
unsigned int m_NumberOfIterations
 
OutputImagePixelType m_ReplaceValue
 
SeedsContainerType m_Seeds
 
InputRealType m_Variance
 

Additional Inherited Members

- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static constexpr unsigned int InputImageDimension = TInputImage::ImageDimension
 
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float progressFixedToFloat (uint32_t fixed)
 
static uint32_t progressFloatToFixed (float f)
 
- Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

template<typename TInputImage, typename TOutputImage>
class itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >

Segment pixels with similar statistics using connectivity.

This filter extracts a connected set of pixels whose pixel intensities are consistent with the pixel statistics of a seed point. The mean and variance across a neighborhood (8-connected, 26-connected, etc.) are calculated for a seed point. Then pixels connected to this seed point whose values are within the confidence interval for the seed point are grouped. The width of the confidence interval is controlled by the "Multiplier" variable (the confidence interval is the mean plus or minus the "Multiplier" times the standard deviation). If the intensity variations across a segment were gaussian, a "Multiplier" setting of 2.5 would define a confidence interval wide enough to capture 99% of samples in the segment.

After this initial segmentation is calculated, the mean and variance are re-calculated. All the pixels in the previous segmentation are used to calculate the mean the standard deviation (as opposed to using the pixels in the neighborhood of the seed point). The segmentation is then recalculated using these refined estimates for the mean and variance of the pixel values. This process is repeated for the specified number of iterations. Setting the "NumberOfIterations" to zero stops the algorithm after the initial segmentation from the seed point.

NOTE: the lower and upper threshold are restricted to lie within the valid numeric limits of the input data pixel type. Also, the limits may be adjusted to contain the seed point's intensity.

ITK Sphinx Examples:
Examples
Examples/Segmentation/ConfidenceConnected.cxx, Examples/Segmentation/ConfidenceConnected3D.cxx, and SphinxExamples/src/Segmentation/RegionGrowing/SegmentPixelsWithSimilarStats/Code.cxx.

Definition at line 64 of file itkConfidenceConnectedImageFilter.h.

Member Typedef Documentation

◆ ConstPointer

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::ConstPointer = SmartPointer<const Self>

Definition at line 73 of file itkConfidenceConnectedImageFilter.h.

◆ IndexType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::IndexType = typename InputImageType::IndexType

Definition at line 85 of file itkConfidenceConnectedImageFilter.h.

◆ InputImagePixelType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::InputImagePixelType = typename InputImageType::PixelType

Definition at line 84 of file itkConfidenceConnectedImageFilter.h.

◆ InputImagePointer

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::InputImagePointer = typename InputImageType::Pointer

Definition at line 82 of file itkConfidenceConnectedImageFilter.h.

◆ InputImageRegionType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::InputImageRegionType = typename InputImageType::RegionType

Definition at line 83 of file itkConfidenceConnectedImageFilter.h.

◆ InputImageType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::InputImageType = TInputImage

Definition at line 81 of file itkConfidenceConnectedImageFilter.h.

◆ InputRealType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::InputRealType = typename NumericTraits<InputImagePixelType>::RealType

Definition at line 95 of file itkConfidenceConnectedImageFilter.h.

◆ OutputImagePixelType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::OutputImagePixelType = typename OutputImageType::PixelType

Definition at line 91 of file itkConfidenceConnectedImageFilter.h.

◆ OutputImagePointer

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::OutputImagePointer = typename OutputImageType::Pointer

Definition at line 89 of file itkConfidenceConnectedImageFilter.h.

◆ OutputImageRegionType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::OutputImageRegionType = typename OutputImageType::RegionType

Definition at line 90 of file itkConfidenceConnectedImageFilter.h.

◆ OutputImageType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::OutputImageType = TOutputImage

Definition at line 88 of file itkConfidenceConnectedImageFilter.h.

◆ Pointer

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::Pointer = SmartPointer<Self>

Definition at line 72 of file itkConfidenceConnectedImageFilter.h.

◆ SeedsContainerType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SeedsContainerType = std::vector<IndexType>

Definition at line 93 of file itkConfidenceConnectedImageFilter.h.

◆ Self

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::Self = ConfidenceConnectedImageFilter

Standard class type aliases.

Definition at line 70 of file itkConfidenceConnectedImageFilter.h.

◆ SizeType

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SizeType = typename InputImageType::SizeType

Definition at line 86 of file itkConfidenceConnectedImageFilter.h.

◆ Superclass

template<typename TInputImage , typename TOutputImage >
using itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::Superclass = ImageToImageFilter<TInputImage, TOutputImage>

Definition at line 71 of file itkConfidenceConnectedImageFilter.h.

Constructor & Destructor Documentation

◆ ConfidenceConnectedImageFilter()

template<typename TInputImage , typename TOutputImage >
itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::ConfidenceConnectedImageFilter ( )
protected

◆ ~ConfidenceConnectedImageFilter()

template<typename TInputImage , typename TOutputImage >
itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::~ConfidenceConnectedImageFilter ( )
overrideprotecteddefault

Member Function Documentation

◆ AddSeed()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::AddSeed ( const IndexType seed)

Add seed point.

◆ ClearSeeds()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::ClearSeeds ( )

Clear all the seeds.

◆ EnlargeOutputRequestedRegion()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::EnlargeOutputRequestedRegion ( DataObject )
overrideprotectedvirtual

Give the process object a chance to indicate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.

Reimplemented from itk::ProcessObject.

◆ GenerateData()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GenerateData ( )
overrideprotectedvirtual

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling DynamicThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter can be threaded, it should NOT provide a GenerateData() method but should provide a DynamicThreadedGenerateData() instead.

See also
ThreadedGenerateData()

Reimplemented from itk::ImageSource< TOutputImage >.

◆ GenerateInputRequestedRegion()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GenerateInputRequestedRegion ( )
overrideprotectedvirtual

What is the input requested region that is required to produce the output requested region? The base assumption for image processing filters is that the input requested region can be set to match the output requested region. If a filter requires more input (for instance a filter that uses neighborhoods needs more input than output to avoid introducing artificial boundary conditions) or less input (for instance a magnify filter) will have to override this method. In doing so, it should call its superclass' implementation as its first step. Note that imaging filters operate differently than the classes to this point in the class hierarchy. Up till now, the base assumption has been that the largest possible region will be requested of the input.

This implementation of GenerateInputRequestedRegion() only processes the inputs that are a subclass of the ImageBase<InputImageDimension>. If an input is another type of DataObject (including an Image of a different dimension), they are skipped by this method. The subclasses of ImageToImageFilter are responsible for providing an implementation of GenerateInputRequestedRegion() when there are multiple inputs of different types.

See also
ProcessObject::GenerateInputRequestedRegion(), ImageSource::GenerateInputRequestedRegion()

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

◆ GetInitialNeighborhoodRadius()

template<typename TInputImage , typename TOutputImage >
virtual const unsigned int& itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetInitialNeighborhoodRadius ( ) const
virtual

Get/Set the radius of the neighborhood over which the statistics are evaluated

◆ GetMean()

template<typename TInputImage , typename TOutputImage >
virtual const InputRealType& itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetMean ( ) const
virtual

Method to get access to the mean of the pixels accepted in the output region. This method should only be invoked after the filter has been executed using the Update() method.

◆ GetMultiplier()

template<typename TInputImage , typename TOutputImage >
virtual double itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetMultiplier ( ) const
virtual

Set/Get the multiplier to define the confidence interval. Multiplier can be anything greater than zero. A typical value is 2.5

◆ GetNameOfClass()

template<typename TInputImage , typename TOutputImage >
virtual const char* itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

◆ GetNumberOfIterations()

template<typename TInputImage , typename TOutputImage >
virtual unsigned int itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetNumberOfIterations ( ) const
virtual

Set/Get the number of iterations

◆ GetReplaceValue()

template<typename TInputImage , typename TOutputImage >
virtual OutputImagePixelType itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetReplaceValue ( ) const
virtual

Set/Get value to replace thresholded pixels

◆ GetSeeds()

template<typename TInputImage , typename TOutputImage >
virtual const SeedsContainerType& itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetSeeds ( ) const
virtual

Method to access seed container

◆ GetVariance()

template<typename TInputImage , typename TOutputImage >
virtual const InputRealType& itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::GetVariance ( ) const
virtual

Method to get access to the variance of the pixels accepted in the output region. This method should only be invoked after the filter has been executed using the Update() method.

◆ New()

template<typename TInputImage , typename TOutputImage >
static Pointer itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::New ( )
static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overridevirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

◆ SetInitialNeighborhoodRadius()

template<typename TInputImage , typename TOutputImage >
virtual void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SetInitialNeighborhoodRadius ( unsigned int  _arg)
virtual

Get/Set the radius of the neighborhood over which the statistics are evaluated

◆ SetMultiplier()

template<typename TInputImage , typename TOutputImage >
virtual void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SetMultiplier ( double  _arg)
virtual

Set/Get the multiplier to define the confidence interval. Multiplier can be anything greater than zero. A typical value is 2.5

◆ SetNumberOfIterations()

template<typename TInputImage , typename TOutputImage >
virtual void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SetNumberOfIterations ( unsigned int  _arg)
virtual

Set/Get the number of iterations

◆ SetReplaceValue()

template<typename TInputImage , typename TOutputImage >
virtual void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SetReplaceValue ( OutputImagePixelType  _arg)
virtual

Set/Get value to replace thresholded pixels

◆ SetSeed()

template<typename TInputImage , typename TOutputImage >
void itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::SetSeed ( const IndexType seed)

Set seed point. This method is deprecated, please use AddSeed()

Member Data Documentation

◆ m_InitialNeighborhoodRadius

template<typename TInputImage , typename TOutputImage >
unsigned int itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_InitialNeighborhoodRadius
private

Definition at line 175 of file itkConfidenceConnectedImageFilter.h.

◆ m_Mean

template<typename TInputImage , typename TOutputImage >
InputRealType itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_Mean
private

Definition at line 176 of file itkConfidenceConnectedImageFilter.h.

◆ m_Multiplier

template<typename TInputImage , typename TOutputImage >
double itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_Multiplier
private

Definition at line 172 of file itkConfidenceConnectedImageFilter.h.

◆ m_NumberOfIterations

template<typename TInputImage , typename TOutputImage >
unsigned int itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_NumberOfIterations
private

Definition at line 173 of file itkConfidenceConnectedImageFilter.h.

◆ m_ReplaceValue

template<typename TInputImage , typename TOutputImage >
OutputImagePixelType itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_ReplaceValue
private

Definition at line 174 of file itkConfidenceConnectedImageFilter.h.

◆ m_Seeds

template<typename TInputImage , typename TOutputImage >
SeedsContainerType itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_Seeds
private

Definition at line 171 of file itkConfidenceConnectedImageFilter.h.

◆ m_Variance

template<typename TInputImage , typename TOutputImage >
InputRealType itk::ConfidenceConnectedImageFilter< TInputImage, TOutputImage >::m_Variance
private

Definition at line 177 of file itkConfidenceConnectedImageFilter.h.


The documentation for this class was generated from the following file: