ITK  5.3.0
Insight Toolkit
itkConfidenceConnectedImageFilter.h
Go to the documentation of this file.
1 /*=========================================================================
2  *
3  * Copyright NumFOCUS
4  *
5  * Licensed under the Apache License, Version 2.0 (the "License");
6  * you may not use this file except in compliance with the License.
7  * You may obtain a copy of the License at
8  *
9  * http://www.apache.org/licenses/LICENSE-2.0.txt
10  *
11  * Unless required by applicable law or agreed to in writing, software
12  * distributed under the License is distributed on an "AS IS" BASIS,
13  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14  * See the License for the specific language governing permissions and
15  * limitations under the License.
16  *
17  *=========================================================================*/
18 #ifndef itkConfidenceConnectedImageFilter_h
19 #define itkConfidenceConnectedImageFilter_h
20 
21 #include "itkImage.h"
22 #include "itkImageToImageFilter.h"
23 
24 namespace itk
25 {
63 template <typename TInputImage, typename TOutputImage>
64 class ITK_TEMPLATE_EXPORT ConfidenceConnectedImageFilter : public ImageToImageFilter<TInputImage, TOutputImage>
65 {
66 public:
67  ITK_DISALLOW_COPY_AND_MOVE(ConfidenceConnectedImageFilter);
68 
74 
76  itkNewMacro(Self);
77 
80 
81  using InputImageType = TInputImage;
82  using InputImagePointer = typename InputImageType::Pointer;
84  using InputImagePixelType = typename InputImageType::PixelType;
87 
88  using OutputImageType = TOutputImage;
89  using OutputImagePointer = typename OutputImageType::Pointer;
91  using OutputImagePixelType = typename OutputImageType::PixelType;
92 
93  using SeedsContainerType = std::vector<IndexType>;
94 
96 
97  void
98  PrintSelf(std::ostream & os, Indent indent) const override;
99 
101  void
102  SetSeed(const IndexType & seed);
103 
105  void
106  ClearSeeds();
107 
109  void
110  AddSeed(const IndexType & seed);
111 
114  itkSetMacro(Multiplier, double);
115  itkGetConstMacro(Multiplier, double);
117 
119  itkSetMacro(NumberOfIterations, unsigned int);
120  itkGetConstMacro(NumberOfIterations, unsigned int);
122 
124  itkSetMacro(ReplaceValue, OutputImagePixelType);
125  itkGetConstMacro(ReplaceValue, OutputImagePixelType);
127 
130  itkSetMacro(InitialNeighborhoodRadius, unsigned int);
131  itkGetConstReferenceMacro(InitialNeighborhoodRadius, unsigned int);
133 
137  itkGetConstReferenceMacro(Mean, InputRealType);
138 
142  itkGetConstReferenceMacro(Variance, InputRealType);
143 
145  virtual const SeedsContainerType &
146  GetSeeds() const;
147 
148 #ifdef ITK_USE_CONCEPT_CHECKING
149  // Begin concept checking
152  // End concept checking
153 #endif
154 
155 protected:
157  ~ConfidenceConnectedImageFilter() override = default;
158 
159  // Override since the filter needs all the data for the algorithm
160  void
161  GenerateInputRequestedRegion() override;
162 
163  // Override since the filter produces the entire dataset
164  void
165  EnlargeOutputRequestedRegion(DataObject * output) override;
166 
167  void
168  GenerateData() override;
169 
170 private:
172  double m_Multiplier;
173  unsigned int m_NumberOfIterations;
178 };
179 } // end namespace itk
180 
181 #ifndef ITK_MANUAL_INSTANTIATION
182 # include "itkConfidenceConnectedImageFilter.hxx"
183 #endif
184 
185 #endif
itk::ConfidenceConnectedImageFilter::m_Multiplier
double m_Multiplier
Definition: itkConfidenceConnectedImageFilter.h:172
itk::Concept::HasNumericTraits
Definition: itkConceptChecking.h:714
itk::ImageSource::OutputImagePointer
typename OutputImageType::Pointer OutputImagePointer
Definition: itkImageSource.h:91
itk::ConfidenceConnectedImageFilter::SizeType
typename InputImageType::SizeType SizeType
Definition: itkConfidenceConnectedImageFilter.h:86
itk::ConfidenceConnectedImageFilter::m_ReplaceValue
OutputImagePixelType m_ReplaceValue
Definition: itkConfidenceConnectedImageFilter.h:174
itk::ConfidenceConnectedImageFilter::IndexType
typename InputImageType::IndexType IndexType
Definition: itkConfidenceConnectedImageFilter.h:85
itk::ConfidenceConnectedImageFilter::InputRealType
typename NumericTraits< InputImagePixelType >::RealType InputRealType
Definition: itkConfidenceConnectedImageFilter.h:95
itk::GTest::TypedefsAndConstructors::Dimension2::SizeType
ImageBaseType::SizeType SizeType
Definition: itkGTestTypedefsAndConstructors.h:49
itkImage.h
itk::SmartPointer< Self >
itk::Indent
Control indentation during Print() invocation.
Definition: itkIndent.h:49
itk::ImageToImageFilter::InputImagePixelType
typename InputImageType::PixelType InputImagePixelType
Definition: itkImageToImageFilter.h:133
itk::GTest::TypedefsAndConstructors::Dimension2::IndexType
ImageBaseType::IndexType IndexType
Definition: itkGTestTypedefsAndConstructors.h:50
itk::ImageToImageFilter
Base class for filters that take an image as input and produce an image as output.
Definition: itkImageToImageFilter.h:108
itk::ImageSource
Base class for all process objects that output image data.
Definition: itkImageSource.h:67
itk::ConfidenceConnectedImageFilter::m_Mean
InputRealType m_Mean
Definition: itkConfidenceConnectedImageFilter.h:176
itk::ImageToImageFilter::InputImagePointer
typename InputImageType::Pointer InputImagePointer
Definition: itkImageToImageFilter.h:130
itk::ConfidenceConnectedImageFilter
Segment pixels with similar statistics using connectivity.
Definition: itkConfidenceConnectedImageFilter.h:64
itk::GTest::TypedefsAndConstructors::Dimension2::RegionType
ImageBaseType::RegionType RegionType
Definition: itkGTestTypedefsAndConstructors.h:54
itk::ConfidenceConnectedImageFilter::m_NumberOfIterations
unsigned int m_NumberOfIterations
Definition: itkConfidenceConnectedImageFilter.h:173
itk::ImageToImageFilter::InputImageType
TInputImage InputImageType
Definition: itkImageToImageFilter.h:129
itkImageToImageFilter.h
itk::NumericTraits
Define additional traits for native types such as int or float.
Definition: itkNumericTraits.h:58
itk::ImageSource::OutputImageRegionType
typename OutputImageType::RegionType OutputImageRegionType
Definition: itkImageSource.h:92
itkConceptMacro
#define itkConceptMacro(name, concept)
Definition: itkConceptChecking.h:65
itk
The "itk" namespace contains all Insight Segmentation and Registration Toolkit (ITK) classes....
Definition: itkAnnulusOperator.h:24
itk::ProcessObject
The base class for all process objects (source, filters, mappers) in the Insight data processing pipe...
Definition: itkProcessObject.h:138
itk::ImageSource::OutputImagePixelType
typename OutputImageType::PixelType OutputImagePixelType
Definition: itkImageSource.h:93
itk::ConfidenceConnectedImageFilter::m_Variance
InputRealType m_Variance
Definition: itkConfidenceConnectedImageFilter.h:177
itk::ConfidenceConnectedImageFilter::m_InitialNeighborhoodRadius
unsigned int m_InitialNeighborhoodRadius
Definition: itkConfidenceConnectedImageFilter.h:175
itk::ImageToImageFilter::InputImageRegionType
typename InputImageType::RegionType InputImageRegionType
Definition: itkImageToImageFilter.h:132
itk::ConfidenceConnectedImageFilter::SeedsContainerType
std::vector< IndexType > SeedsContainerType
Definition: itkConfidenceConnectedImageFilter.h:93
itk::ImageSource::OutputImageType
TOutputImage OutputImageType
Definition: itkImageSource.h:90
itk::DataObject
Base class for all data objects in ITK.
Definition: itkDataObject.h:293
itk::ConfidenceConnectedImageFilter::m_Seeds
SeedsContainerType m_Seeds
Definition: itkConfidenceConnectedImageFilter.h:171