#include <itkShapePriorMAPCostFunctionBase.h>

Detailed Description

template<typename TFeatureImage, typename TOutputPixel>
class itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >

Represents the base class of maximum aprior (MAP) cost function used ShapePriorSegmentationLevelSetImageFilter to estimate the shape parameters.

This class follows the shape and pose parameters estimation developed in [1].

This class has two template parameters, the feature image type representing the edge potential map and the pixel type used to represent the output level set in the ShapePriorSegmentationLevelSetImageFilter.

See also: ShapePriorSegmentationLevelSetImageFilter

REFERENCES

: [1] Leventon, M.E. et al. "Statistical Shape Influence in Geodesic Active Contours", CVPR 2000.

Definition at line 48 of file itkShapePriorMAPCostFunctionBase.h.

Inheritance diagram for itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >:

Collaboration diagram for itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >:

Public Types
using	ConstPointer = SmartPointer< const Self >

using	FeatureImagePointer = typename FeatureImageType::ConstPointer

using	FeatureImageType = TFeatureImage

using	NodeContainerPointer = typename NodeContainerType::ConstPointer

using	NodeContainerType = VectorContainer< unsigned int, NodeType >

using	NodeType = LevelSetNode< PixelType, Self::ImageDimension >

using	PixelType = TOutputPixel

using	Pointer = SmartPointer< Self >

using	Self = ShapePriorMAPCostFunctionBase

using	ShapeFunctionPointer = typename ShapeFunctionType::Pointer

using	ShapeFunctionType = ShapeSignedDistanceFunction< double, Self::ImageDimension >

using	Superclass = SingleValuedCostFunction

Public Types inherited from itk::SingleValuedCostFunction
using	ConstPointer = SmartPointer< const Self >

using	DerivativeType = Array< ParametersValueType >

using	MeasureType = double

using	ParametersType = Superclass::ParametersType

using	ParametersValueType = Superclass::ParametersValueType

using	Pointer = SmartPointer< Self >

using	Self = SingleValuedCostFunction

using	Superclass = CostFunction

Public Types inherited from itk::CostFunctionTemplate< TInternalComputationValueType >
using	ConstPointer = SmartPointer< const Self >

using	ParametersType = OptimizerParameters< TInternalComputationValueType >

using	ParametersValueType = TInternalComputationValueType

using	Pointer = SmartPointer< Self >

using	Self = CostFunctionTemplate

using	Superclass = Object

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
virtual MeasureType	ComputeLogGradientTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogInsideTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogPosePriorTerm (const ParametersType &) const =0

virtual MeasureType	ComputeLogShapePriorTerm (const ParametersType &) const =0

void	GetDerivative (const ParametersType &, DerivativeType &) const override

const char *	GetNameOfClass () const override

unsigned int	GetNumberOfParameters () const override

MeasureType	GetValue (const ParametersType &parameters) const override

virtual void	Initialize ()


virtual void	SetShapeFunction (ShapeFunctionType *_arg)

virtual ShapeFunctionType *	GetModifiableShapeFunction ()


virtual void	SetActiveRegion (const NodeContainerType *_arg)

virtual const NodeContainerType *	GetActiveRegion () const


virtual void	SetFeatureImage (const FeatureImageType *_arg)

virtual const FeatureImageType *	GetFeatureImage () const

Public Member Functions inherited from itk::SingleValuedCostFunction
virtual void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *cmd) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

LightObject::Pointer	CreateAnother () const override

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag) const

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual void	Delete ()

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

Static Public Attributes
static constexpr unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
void	PrintSelf (std::ostream &os, Indent indent) const override

	ShapePriorMAPCostFunctionBase ()

	~ShapePriorMAPCostFunctionBase () override=default

Protected Member Functions inherited from itk::SingleValuedCostFunction
	SingleValuedCostFunction ()=default

	~SingleValuedCostFunction () override

Protected Member Functions inherited from itk::CostFunctionTemplate< TInternalComputationValueType >
	CostFunctionTemplate ()=default

	~CostFunctionTemplate () override=default

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

	~Object () override

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Protected Attributes
NodeContainerPointer	m_ActiveRegion {}

FeatureImagePointer	m_FeatureImage {}

ShapeFunctionPointer	m_ShapeFunction {}

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount {}

Additional Inherited Members
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Member Typedef Documentation

◆ ConstPointer

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ConstPointer = SmartPointer<const Self>

Definition at line 57 of file itkShapePriorMAPCostFunctionBase.h.

◆ FeatureImagePointer

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::FeatureImagePointer = typename FeatureImageType::ConstPointer

Definition at line 76 of file itkShapePriorMAPCostFunctionBase.h.

◆ FeatureImageType

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::FeatureImageType = TFeatureImage

Type of the feature image representing the edge potential map.

Definition at line 75 of file itkShapePriorMAPCostFunctionBase.h.

◆ NodeContainerPointer

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeContainerPointer = typename NodeContainerType::ConstPointer

Definition at line 89 of file itkShapePriorMAPCostFunctionBase.h.

◆ NodeContainerType

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeContainerType = VectorContainer<unsigned int, NodeType>

Type of container used to store the level set nodes.

Definition at line 88 of file itkShapePriorMAPCostFunctionBase.h.

◆ NodeType

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::NodeType = LevelSetNode<PixelType, Self::ImageDimension>

Type of node used to represent the active region around the zero set.

Definition at line 85 of file itkShapePriorMAPCostFunctionBase.h.

◆ PixelType

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::PixelType = TOutputPixel

Type of pixel used to represent the level set.

Definition at line 82 of file itkShapePriorMAPCostFunctionBase.h.

◆ Pointer

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Pointer = SmartPointer<Self>

Definition at line 56 of file itkShapePriorMAPCostFunctionBase.h.

◆ Self

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Self = ShapePriorMAPCostFunctionBase

Standard class type aliases.

Definition at line 54 of file itkShapePriorMAPCostFunctionBase.h.

◆ ShapeFunctionPointer

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapeFunctionPointer = typename ShapeFunctionType::Pointer

Definition at line 93 of file itkShapePriorMAPCostFunctionBase.h.

◆ ShapeFunctionType

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapeFunctionType = ShapeSignedDistanceFunction<double, Self::ImageDimension>

Type of the shape signed distance function.

Definition at line 92 of file itkShapePriorMAPCostFunctionBase.h.

◆ Superclass

template<typename TFeatureImage , typename TOutputPixel >

using itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Superclass = SingleValuedCostFunction

Definition at line 55 of file itkShapePriorMAPCostFunctionBase.h.

Constructor & Destructor Documentation

◆ ShapePriorMAPCostFunctionBase()

template<typename TFeatureImage , typename TOutputPixel >

itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ShapePriorMAPCostFunctionBase ( )

protected

◆ ~ShapePriorMAPCostFunctionBase()

template<typename TFeatureImage , typename TOutputPixel >

itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::~ShapePriorMAPCostFunctionBase ( )

overrideprotecteddefault

Member Function Documentation

◆ ComputeLogGradientTerm()

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogGradientTerm ( const ParametersType & ) const

pure virtual

Compute the gradient term component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

◆ ComputeLogInsideTerm()

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogInsideTerm ( const ParametersType & ) const

pure virtual

Compute the inside term component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

◆ ComputeLogPosePriorTerm()

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogPosePriorTerm ( const ParametersType & ) const

pure virtual

Compute the pose prior component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

◆ ComputeLogShapePriorTerm()

template<typename TFeatureImage , typename TOutputPixel >

virtual MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ComputeLogShapePriorTerm ( const ParametersType & ) const

pure virtual

Compute the shape prior component of the MAP cost function. Subclasses should override this function

Implemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

◆ GetActiveRegion()

template<typename TFeatureImage , typename TOutputPixel >

virtual const NodeContainerType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetActiveRegion ( ) const

virtual

Set/Get the active region.

◆ GetDerivative()

template<typename TFeatureImage , typename TOutputPixel >

void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetDerivative	(	const ParametersType &	,
		DerivativeType &
	)		const

inlineoverridevirtual

This method returns the derivative of the cost function corresponding to the specified parameters.

Implements itk::SingleValuedCostFunction.

Definition at line 118 of file itkShapePriorMAPCostFunctionBase.h.

◆ GetFeatureImage()

template<typename TFeatureImage , typename TOutputPixel >

virtual const FeatureImageType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetFeatureImage ( ) const

virtual

Set/Get the feature image.

◆ GetModifiableShapeFunction()

template<typename TFeatureImage , typename TOutputPixel >

virtual ShapeFunctionType* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetModifiableShapeFunction ( )

virtual

Set/Get the shape distance function.

◆ GetNameOfClass()

template<typename TFeatureImage , typename TOutputPixel >

const char* itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetNameOfClass ( ) const

overridevirtual

See also: LightObject::GetNameOfClass()

Reimplemented from itk::SingleValuedCostFunction.

◆ GetNumberOfParameters()

template<typename TFeatureImage , typename TOutputPixel >

unsigned int itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetNumberOfParameters ( ) const

inlineoverridevirtual

Return the number of parameters.

Implements itk::CostFunctionTemplate< TInternalComputationValueType >.

Definition at line 125 of file itkShapePriorMAPCostFunctionBase.h.

◆ GetValue()

template<typename TFeatureImage , typename TOutputPixel >

MeasureType itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::GetValue ( const ParametersType & parameters ) const

overridevirtual

This method returns the value of the cost function corresponding to the specified parameters.

Implements itk::SingleValuedCostFunction.

◆ Initialize()

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::Initialize ( )

virtual

Initialize the cost function by making sure that all the components are present.

Reimplemented in itk::ShapePriorMAPCostFunction< TFeatureImage, TOutputPixel >.

◆ PrintSelf()

template<typename TFeatureImage , typename TOutputPixel >

void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::CostFunctionTemplate< TInternalComputationValueType >.

◆ SetActiveRegion()

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetActiveRegion ( const NodeContainerType * _arg )

virtual

Set/Get the active region.

◆ SetFeatureImage()

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetFeatureImage ( const FeatureImageType * _arg )

virtual

Set/Get the feature image.

◆ SetShapeFunction()

template<typename TFeatureImage , typename TOutputPixel >

virtual void itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::SetShapeFunction ( ShapeFunctionType * _arg )

virtual

Set/Get the shape distance function.

Member Data Documentation

◆ ImageDimension

template<typename TFeatureImage , typename TOutputPixel >

constexpr unsigned int itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::ImageDimension = TFeatureImage::ImageDimension

staticconstexpr

Dimension constant.

Definition at line 79 of file itkShapePriorMAPCostFunctionBase.h.

◆ m_ActiveRegion

template<typename TFeatureImage , typename TOutputPixel >

NodeContainerPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ActiveRegion {}

protected

Definition at line 163 of file itkShapePriorMAPCostFunctionBase.h.

◆ m_FeatureImage

template<typename TFeatureImage , typename TOutputPixel >

FeatureImagePointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_FeatureImage {}

protected

Definition at line 165 of file itkShapePriorMAPCostFunctionBase.h.

◆ m_ShapeFunction

template<typename TFeatureImage , typename TOutputPixel >

ShapeFunctionPointer itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >::m_ShapeFunction {}

protected

Definition at line 162 of file itkShapePriorMAPCostFunctionBase.h.

The documentation for this class was generated from the following file:

itkShapePriorMAPCostFunctionBase.h

Detailed Description

template<typename TFeatureImage, typename TOutputPixel> class itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >

Public Types

Public Member Functions

Static Public Attributes

Protected Member Functions

Protected Attributes

Additional Inherited Members

Member Typedef Documentation

◆ ConstPointer

◆ FeatureImagePointer

◆ FeatureImageType

◆ NodeContainerPointer

◆ NodeContainerType

◆ NodeType

◆ PixelType

◆ Pointer

◆ Self

◆ ShapeFunctionPointer

◆ ShapeFunctionType

◆ Superclass

Constructor & Destructor Documentation

◆ ShapePriorMAPCostFunctionBase()

◆ ~ShapePriorMAPCostFunctionBase()

Member Function Documentation

◆ ComputeLogGradientTerm()

◆ ComputeLogInsideTerm()

◆ ComputeLogPosePriorTerm()

◆ ComputeLogShapePriorTerm()

◆ GetActiveRegion()

◆ GetDerivative()

◆ GetFeatureImage()

◆ GetModifiableShapeFunction()

◆ GetNameOfClass()

◆ GetNumberOfParameters()

◆ GetValue()

◆ Initialize()

◆ PrintSelf()

◆ SetActiveRegion()

◆ SetFeatureImage()

◆ SetShapeFunction()

Member Data Documentation

◆ ImageDimension

◆ m_ActiveRegion

◆ m_FeatureImage

◆ m_ShapeFunction

template<typename TFeatureImage, typename TOutputPixel>
class itk::ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixel >