template<typename TInputImage, typename TFeatureImage, typename TOutputPixelType = float>
class itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
A base class which defines the API for implementing a level set segmentation filter with statistical shape influence.
- OVERVIEW
- This class extends the functionality of SegmentationLevelSetImageFilter with an additional statistical shape influence term in the level set evolution as developed in [1].
- TEMPLATE PARAMETERS
- There are two required and one optional template parameter for these filters.
TInputImage is the image type of the initial model you will input to the filter using SetInput() or SetInitialImage().
TFeatureImage is the image type of the image from which the filter will calculate the speed term for segmentation (see INPUTS).
TOutputPixelType is the data type used for the output image phi, the implicit level set image. This should really only ever be set as float (default) or double.
- PARAMETERS
- From a level set evolution point of view, the shape is represented by a signed distance function from the shape encapsulated in a ShapeSignedDistanceFunction object.
- See also
- ShapeSignedDistanceFunction
-
ShapePriorSegmentationLevelSetFunction
- REFERENCES
- [1] Leventon, M.E. et al. "Statistical Shape Influence in Geodesic Active Contours", CVPR 2000.
Definition at line 73 of file itkShapePriorSegmentationLevelSetImageFilter.h.
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using | ConstPointer = SmartPointer< const Self > |
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using | CostFunctionPointer = typename CostFunctionType::Pointer |
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using | CostFunctionType = ShapePriorMAPCostFunctionBase< TFeatureImage, TOutputPixelType > |
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using | NodeContainerPointer = typename NodeContainerType::Pointer |
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using | NodeContainerType = typename CostFunctionType::NodeContainerType |
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using | NodeType = typename CostFunctionType::NodeType |
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using | OptimizerPointer = typename OptimizerType::Pointer |
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using | OptimizerType = SingleValuedNonLinearOptimizer |
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using | OutputPixelType = TOutputPixelType |
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using | ParametersType = typename CostFunctionType::ParametersType |
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using | Pointer = SmartPointer< Self > |
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using | Self = ShapePriorSegmentationLevelSetImageFilter |
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using | ShapeFunctionPointer = typename ShapeFunctionType::Pointer |
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using | ShapeFunctionType = typename ShapePriorSegmentationFunctionType::ShapeFunctionType |
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using | ShapePriorSegmentationFunctionType = ShapePriorSegmentationLevelSetFunction< OutputImageType, FeatureImageType > |
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using | Superclass = SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType > |
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using | ConstPointer = SmartPointer< const Self > |
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using | FeatureImageType = TFeatureImage |
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using | OutputImageType = Image< TOutputPixelType, Self::InputImageDimension > |
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using | Pointer = SmartPointer< Self > |
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using | SegmentationFunctionType = SegmentationLevelSetFunction< OutputImageType, FeatureImageType > |
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using | Self = SegmentationLevelSetImageFilter |
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using | SpeedImageType = typename SegmentationFunctionType::ImageType |
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using | Superclass = SparseFieldLevelSetImageFilter< TInputImage, OutputImageType > |
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using | VectorImageType = typename SegmentationFunctionType::VectorImageType |
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using | ConstPointer = SmartPointer< const Self > |
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using | IndexType = typename OutputImageType::IndexType |
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using | InputImageType = TInputImage |
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using | LayerListType = std::vector< LayerPointerType > |
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using | LayerNodeStorageType = ObjectStore< LayerNodeType > |
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using | LayerNodeType = SparseFieldLevelSetNode< IndexType > |
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using | LayerPointerType = typename LayerType::Pointer |
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using | LayerType = SparseFieldLayer< LayerNodeType > |
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using | OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension > |
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using | Pointer = SmartPointer< Self > |
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using | Self = SparseFieldLevelSetImageFilter |
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using | StatusImageType = Image< StatusType, Self::ImageDimension > |
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using | StatusType = signed char |
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using | Superclass = FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | UpdateBufferType = std::vector< ValueType > |
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using | ValueType = typename OutputImageType::ValueType |
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using | ConstPointer = SmartPointer< const Self > |
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using | FiniteDifferenceFunctionType = FiniteDifferenceFunction< Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | InputImageType = TInputImage |
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using | InputPixelType = typename TInputImage::PixelType |
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using | InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType |
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using | NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType |
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using | OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension > |
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using | OutputPixelType = typename Image< TOutputPixelType, TInputImage::ImageDimension > ::PixelType |
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using | OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType |
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using | PixelType = OutputPixelType |
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using | Pointer = SmartPointer< Self > |
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using | RadiusType = typename FiniteDifferenceFunctionType::RadiusType |
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using | Self = FiniteDifferenceImageFilter |
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using | Superclass = InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType |
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using | ConstPointer = SmartPointer< const Self > |
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using | InputImageConstPointer = typename InputImageType::ConstPointer |
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using | InputImagePixelType = typename InputImageType::PixelType |
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using | InputImagePointer = typename InputImageType::Pointer |
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using | InputImageRegionType = typename InputImageType::RegionType |
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using | InputImageType = TInputImage |
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using | Pointer = SmartPointer< Self > |
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using | Self = InPlaceImageFilter |
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using | Superclass = ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | ConstPointer = SmartPointer< const Self > |
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using | InputImageConstPointer = typename InputImageType::ConstPointer |
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using | InputImagePixelType = typename InputImageType::PixelType |
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using | InputImagePointer = typename InputImageType::Pointer |
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using | InputImageRegionType = typename InputImageType::RegionType |
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using | InputImageType = TInputImage |
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using | Pointer = SmartPointer< Self > |
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using | Self = ImageToImageFilter |
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using | Superclass = ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > > |
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using | ConstPointer = SmartPointer< const Self > |
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using | DataObjectIdentifierType = Superclass::DataObjectIdentifierType |
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using | DataObjectPointer = DataObject::Pointer |
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using | DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType |
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using | OutputImagePixelType = typename OutputImageType::PixelType |
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using | OutputImagePointer = typename OutputImageType::Pointer |
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using | OutputImageRegionType = typename OutputImageType::RegionType |
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using | OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension > |
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using | Pointer = SmartPointer< Self > |
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using | Self = ImageSource |
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using | Superclass = ProcessObject |
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using | ConstPointer = SmartPointer< const Self > |
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using | DataObjectIdentifierType = DataObject::DataObjectIdentifierType |
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using | DataObjectPointer = DataObject::Pointer |
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using | DataObjectPointerArray = std::vector< DataObjectPointer > |
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using | DataObjectPointerArraySizeType = DataObjectPointerArray::size_type |
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using | MultiThreaderType = MultiThreaderBase |
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using | NameArray = std::vector< DataObjectIdentifierType > |
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using | Pointer = SmartPointer< Self > |
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using | Self = ProcessObject |
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using | Superclass = Object |
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using | ConstPointer = SmartPointer< const Self > |
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using | Pointer = SmartPointer< Self > |
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using | Self = Object |
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using | Superclass = LightObject |
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using | ConstPointer = SmartPointer< const Self > |
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using | Pointer = SmartPointer< Self > |
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using | Self = LightObject |
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void | ExtractActiveRegion (NodeContainerType *ptr) |
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void | GenerateData () override |
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void | InitializeIteration () override |
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void | PrintSelf (std::ostream &os, Indent indent) const override |
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| ShapePriorSegmentationLevelSetImageFilter () |
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| ~ShapePriorSegmentationLevelSetImageFilter () override=default |
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| SegmentationLevelSetImageFilter () |
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| ~SegmentationLevelSetImageFilter () override=default |
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void | AllocateUpdateBuffer () override |
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void | ApplyUpdate (const TimeStepType &dt) override |
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TimeStepType | CalculateChange () override |
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virtual ValueType | CalculateUpdateValue (const IndexType &, const TimeStepType &dt, const ValueType &value, const ValueType &change) |
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void | ConstructActiveLayer () |
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void | ConstructLayer (StatusType from, StatusType to) |
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void | CopyInputToOutput () override |
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virtual ValueType | GetValueOne () const |
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virtual ValueType | GetValueZero () const |
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void | Initialize () override |
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void | InitializeActiveLayerValues () |
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virtual void | InitializeBackgroundPixels () |
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void | PostProcessOutput () override |
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void | PrintSelf (std::ostream &os, Indent indent) const override |
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void | ProcessOutsideList (LayerType *OutsideList, StatusType ChangeToStatus) |
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void | ProcessStatusList (LayerType *InputList, LayerType *OutputList, StatusType ChangeToStatus, StatusType SearchForStatus) |
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void | PropagateAllLayerValues () |
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void | PropagateLayerValues (StatusType from, StatusType to, StatusType promote, int InOrOut) |
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| SparseFieldLevelSetImageFilter () |
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void | UpdateActiveLayerValues (TimeStepType dt, LayerType *UpList, LayerType *DownList) |
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| ~SparseFieldLevelSetImageFilter () override=default |
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| FiniteDifferenceImageFilter () |
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void | GenerateData () override |
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void | GenerateInputRequestedRegion () override |
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virtual bool | Halt () |
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virtual TimeStepType | ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const BooleanStdVectorType &valid) const |
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virtual void | SetElapsedIterations (IdentifierType _arg) |
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virtual bool | ThreadedHalt (void *) |
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| ~FiniteDifferenceImageFilter () override=default |
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virtual bool | GetRunningInPlace () const |
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| InPlaceImageFilter ()=default |
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void | ReleaseInputs () override |
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| ~InPlaceImageFilter () override=default |
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void | AllocateOutputs () override |
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virtual void | CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion) |
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virtual void | CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion) |
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| ImageToImageFilter () |
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void | VerifyInputInformation () const override |
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| ~ImageToImageFilter () override=default |
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virtual void | PushBackInput (const DataObject *input) |
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virtual void | PushFrontInput (const DataObject *input) |
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virtual void | AfterThreadedGenerateData () |
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virtual void | BeforeThreadedGenerateData () |
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void | ClassicMultiThread (ThreadFunctionType callbackFunction) |
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virtual const ImageRegionSplitterBase * | GetImageRegionSplitter () const |
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| ImageSource () |
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virtual unsigned int | SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion) |
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| ~ImageSource () override=default |
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virtual void | ThreadedGenerateData (const OutputImageRegionType ®ion, ThreadIdType threadId) |
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virtual void | DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread) |
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virtual bool | GetDynamicMultiThreading () const |
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virtual void | SetDynamicMultiThreading (bool _arg) |
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virtual void | DynamicMultiThreadingOn () |
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virtual void | AddInput (DataObject *input) |
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void | AddOptionalInputName (const DataObjectIdentifierType &) |
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void | AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx) |
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virtual void | AddOutput (DataObject *output) |
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bool | AddRequiredInputName (const DataObjectIdentifierType &) |
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bool | AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx) |
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virtual void | CacheInputReleaseDataFlags () |
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virtual void | GenerateOutputInformation () |
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virtual void | GenerateOutputRequestedRegion (DataObject *output) |
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DataObject * | GetInput (const DataObjectIdentifierType &key) |
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const DataObject * | GetInput (const DataObjectIdentifierType &key) const |
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virtual const DataObjectPointerArraySizeType & | GetNumberOfRequiredInputs () const |
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virtual const DataObjectPointerArraySizeType & | GetNumberOfRequiredOutputs () const |
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bool | IsIndexedInputName (const DataObjectIdentifierType &) const |
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bool | IsIndexedOutputName (const DataObjectIdentifierType &) const |
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bool | IsRequiredInputName (const DataObjectIdentifierType &) const |
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DataObjectPointerArraySizeType | MakeIndexFromInputName (const DataObjectIdentifierType &name) const |
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DataObjectPointerArraySizeType | MakeIndexFromOutputName (const DataObjectIdentifierType &name) const |
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DataObjectIdentifierType | MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const |
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DataObjectIdentifierType | MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const |
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| ProcessObject () |
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virtual void | PropagateResetPipeline () |
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virtual void | PushBackInput (const DataObject *input) |
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virtual void | PushFrontInput (const DataObject *input) |
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virtual void | RemoveInput (const DataObjectIdentifierType &key) |
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virtual void | RemoveInput (DataObjectPointerArraySizeType) |
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virtual void | RemoveOutput (const DataObjectIdentifierType &key) |
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virtual void | RemoveOutput (DataObjectPointerArraySizeType idx) |
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bool | RemoveRequiredInputName (const DataObjectIdentifierType &) |
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virtual void | RestoreInputReleaseDataFlags () |
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virtual void | SetInput (const DataObjectIdentifierType &key, DataObject *input) |
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virtual void | SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input) |
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virtual void | SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output) |
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void | SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num) |
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void | SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num) |
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virtual void | SetNumberOfRequiredInputs (DataObjectPointerArraySizeType) |
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virtual void | SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg) |
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virtual void | SetOutput (const DataObjectIdentifierType &name, DataObject *output) |
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virtual void | SetPrimaryInput (DataObject *object) |
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virtual void | SetPrimaryOutput (DataObject *object) |
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void | SetRequiredInputNames (const NameArray &) |
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virtual void | VerifyPreconditions () const |
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| ~ProcessObject () override |
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DataObject * | GetInput (DataObjectPointerArraySizeType idx) |
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const DataObject * | GetInput (DataObjectPointerArraySizeType idx) const |
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DataObject * | GetPrimaryInput () |
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const DataObject * | GetPrimaryInput () const |
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virtual void | SetPrimaryInputName (const DataObjectIdentifierType &key) |
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virtual const char * | GetPrimaryInputName () const |
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DataObject * | GetOutput (const DataObjectIdentifierType &key) |
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const DataObject * | GetOutput (const DataObjectIdentifierType &key) const |
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virtual void | SetPrimaryOutputName (const DataObjectIdentifierType &key) |
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virtual const char * | GetPrimaryOutputName () const |
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DataObject * | GetOutput (DataObjectPointerArraySizeType i) |
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const DataObject * | GetOutput (DataObjectPointerArraySizeType i) const |
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DataObject * | GetPrimaryOutput () |
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const DataObject * | GetPrimaryOutput () const |
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virtual bool | GetThreaderUpdateProgress () const |
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virtual void | ThreaderUpdateProgressOn () |
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virtual void | SetThreaderUpdateProgress (bool arg) |
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| Object () |
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bool | PrintObservers (std::ostream &os, Indent indent) const |
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virtual void | SetTimeStamp (const TimeStamp &timeStamp) |
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| ~Object () override |
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virtual LightObject::Pointer | InternalClone () const |
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| LightObject () |
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virtual void | PrintHeader (std::ostream &os, Indent indent) const |
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virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
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virtual | ~LightObject () |
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