ITK  5.0.0
Insight Segmentation and Registration Toolkit
Classes | Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Static Private Member Functions | Private Attributes | List of all members
itk::VariationalRegistrationElasticRegularizer< TDisplacementField > Class Template Reference

#include <itkVariationalRegistrationElasticRegularizer.h>

+ Inheritance diagram for itk::VariationalRegistrationElasticRegularizer< TDisplacementField >:
+ Collaboration diagram for itk::VariationalRegistrationElasticRegularizer< TDisplacementField >:

Detailed Description

template<typename TDisplacementField>
class itk::VariationalRegistrationElasticRegularizer< TDisplacementField >

This class performs linear elastic regularization of a vector field.

This class implements linear elastic regularization as described in Modersitzki. "Numerical methods for image registration". OUP Oxford, 2003..

We compute $u^{out}=(Id - A)^{-1}[u^{in}]$ with $A[u]=\mu\Delta u + (\mu+\lambda)\nabla(\nabla\cdot u)$ using an FFT based method. Please note that for given Lame constants $\mu'$ and $\lambda'$ you have to set $\mu=\tau\mu'$ and $\lambda=\tau\lambda'$ (see Eq.(2) in VariationalRegistrationFilter).

See Also
VariationalRegistrationFilter
VariationalRegistrationRegularizer
Warning
This class is only implemented for image dimension 2 or 3.
Note
This class was developed with funding from the German Research Foundation (DFG: EH 224/3-1 and HA 235/9-1).
Author
Alexander Schmidt-Richberg
Rene Werner
Jan Ehrhardt

Definition at line 58 of file itkVariationalRegistrationElasticRegularizer.h.

Classes

struct  ElasticFFTThreadStruct
 

Public Types

using ConstPointer = SmartPointer< const Self >
 
using DisplacementFieldConstPointer = typename Superclass::DisplacementFieldConstPointer
 
using DisplacementFieldPointer = typename Superclass::DisplacementFieldPointer
 
using DisplacementFieldType = typename Superclass::DisplacementFieldType
 
using FFTWProxyType = typename fftw::Proxy< RealTypeFFT >
 
typedef
DisplacementFieldType::SizeType::SizeValueType 
OffsetValueType
 
using PixelType = typename Superclass::PixelType
 
using Pointer = SmartPointer< Self >
 
using RealTypeFFT = double
 
using Self = VariationalRegistrationElasticRegularizer
 
using Superclass = VariationalRegistrationRegularizer< TDisplacementField >
 
using ValueType = typename Superclass::ValueType
 
- Public Types inherited from itk::VariationalRegistrationRegularizer< TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using DisplacementFieldConstPointer = typename DisplacementFieldType::ConstPointer
 
using DisplacementFieldPointer = typename DisplacementFieldType::Pointer
 
using DisplacementFieldType = TDisplacementField
 
using PixelType = typename DisplacementFieldType::PixelType
 
using Pointer = SmartPointer< Self >
 
using Self = VariationalRegistrationRegularizer
 
using Superclass = InPlaceImageFilter< TDisplacementField, TDisplacementField >
 
using ValueType = typename NumericTraits< PixelType >::ValueType
 
- Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TDisplacementField
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using OutputImageType = typename Superclass::OutputImageType
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TDisplacementField, TDisplacementField >
 
- Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TDisplacementField
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TDisplacementField >
 
- Public Types inherited from itk::ImageSource< TDisplacementField >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TDisplacementField
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual ValueType GetLambda () const
 
virtual ValueType GetMu () const
 
virtual const char * GetNameOfClass () const
 
virtual void SetLambda (ValueType _arg)
 
virtual void SetMu (ValueType _arg)
 
- Public Member Functions inherited from itk::VariationalRegistrationRegularizer< TDisplacementField >
virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual bool GetUseImageSpacing () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOff ()
 
virtual void UseImageSpacingOn ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual bool CanRunInPlace () const
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TDisplacementField *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageTypeGetOutput (unsigned int idx)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexceptoverride
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::VariationalRegistrationRegularizer< TDisplacementField >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int ImageDimension = TDisplacementField::ImageDimension
 
- Static Public Attributes inherited from itk::VariationalRegistrationRegularizer< TDisplacementField >
static constexpr unsigned int ImageDimension = TDisplacementField::ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static constexpr unsigned int OutputImageDimension
 

Protected Member Functions

DisplacementFieldType::IndexType CalculateComplexImageIndex (OffsetValueType offset)
 
virtual void FreeData ()
 
void GenerateData () override
 
void Initialize () override
 
virtual bool InitializeElasticFFTPlans ()
 
virtual bool InitializeElasticMatrix ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void Regularize ()
 
virtual void SolveElasticLES ()
 
virtual void ThreadedSolveElasticLES (OffsetValueType from, OffsetValueType to)
 
 VariationalRegistrationElasticRegularizer ()
 
 ~VariationalRegistrationElasticRegularizer () override
 
- Protected Member Functions inherited from itk::VariationalRegistrationRegularizer< TDisplacementField >
void PrintSelf (std::ostream &os, Indent indent) const override
 
 VariationalRegistrationRegularizer ()
 
 ~VariationalRegistrationRegularizer () override
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
void AllocateOutputs () override
 
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
void ReleaseInputs () override
 
 ~InPlaceImageFilter () override=default
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
void GenerateInputRequestedRegion () override
 
 ImageToImageFilter ()
 
void VerifyInputInformation () ITKv5_CONST override
 
 ~ImageToImageFilter () override
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
void GenerateData () override
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Static Private Member Functions

static ITK_THREAD_RETURN_TYPE SolveElasticLESThreaderCallback (void *vargs)
 

Private Attributes

OffsetValueType m_ComplexOffsetTable [ImageDimension]
 
DisplacementFieldType::SizeType m_ComplexSize
 
ValueType m_Lambda
 
double * m_MatrixCos [ImageDimension]
 
double * m_MatrixSin [ImageDimension]
 
ValueType m_Mu
 
DisplacementFieldType::SizeType m_Size
 
DisplacementFieldType::SpacingType m_Spacing
 
OffsetValueType m_TotalComplexSize
 
OffsetValueType m_TotalSize
 

Additional Inherited Members

- Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static
ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION 
ThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::ImageSource< TDisplacementField >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Member Typedef Documentation

template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::ConstPointer = SmartPointer< const Self >
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::DisplacementFieldConstPointer = typename Superclass::DisplacementFieldConstPointer
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::DisplacementFieldPointer = typename Superclass::DisplacementFieldPointer
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::DisplacementFieldType = typename Superclass::DisplacementFieldType

Deformation field types, inherited from Superclass.

Definition at line 81 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::FFTWProxyType = typename fftw::Proxy<RealTypeFFT>
template<typename TDisplacementField >
typedef DisplacementFieldType::SizeType::SizeValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::OffsetValueType
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::PixelType = typename Superclass::PixelType
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::Pointer = SmartPointer< Self >
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::RealTypeFFT = double

Types for FFTW proxy

Definition at line 93 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::Self = VariationalRegistrationElasticRegularizer

Standard class type alias

Definition at line 65 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::Superclass = VariationalRegistrationRegularizer< TDisplacementField >
template<typename TDisplacementField >
using itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::ValueType = typename Superclass::ValueType

Constructor & Destructor Documentation

template<typename TDisplacementField >
itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::VariationalRegistrationElasticRegularizer ( )
protected
template<typename TDisplacementField >
itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::~VariationalRegistrationElasticRegularizer ( )
inlineoverrideprotected

Member Function Documentation

template<typename TDisplacementField >
DisplacementFieldType::IndexType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::CalculateComplexImageIndex ( OffsetValueType  offset)
protected

Calculate the index in the complex image for a given offset.

template<typename TDisplacementField >
virtual::itk::LightObject::Pointer itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TDisplacementField >
virtual void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::FreeData ( )
protectedvirtual

Delete all data allocated during Initialize()

template<typename TDisplacementField >
void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::GenerateData ( )
overrideprotectedvirtual

Execute regularization. This method is multi-threaded but does not use ThreadedGenerateData().

Reimplemented from itk::ProcessObject.

template<typename TDisplacementField >
virtual ValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::GetLambda ( ) const
virtual

Get the regularization weight lambda.

template<typename TDisplacementField >
virtual ValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::GetMu ( ) const
virtual

Get the regularization weight mu.

template<typename TDisplacementField >
virtual const char* itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods)

Reimplemented from itk::VariationalRegistrationRegularizer< TDisplacementField >.

template<typename TDisplacementField >
void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::Initialize ( )
overrideprotectedvirtual

Method for initialization. Buffer images are allocated and the matrices calculated in this method.

Reimplemented from itk::VariationalRegistrationRegularizer< TDisplacementField >.

template<typename TDisplacementField >
virtual bool itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::InitializeElasticFFTPlans ( )
protectedvirtual

Initialize FFTW plans and multi-threading, allocate arrays for FFT

template<typename TDisplacementField >
virtual bool itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::InitializeElasticMatrix ( )
protectedvirtual

Precompute sine and cosine values for solving the LES

template<typename TDisplacementField >
static Pointer itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::New ( )
static

Method for creation through the object factory.

template<typename TDisplacementField >
void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Print information about the filter.

Reimplemented from itk::ProcessObject.

template<typename TDisplacementField >
virtual void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::Regularize ( )
protectedvirtual

Regularize the deformation field. This is called by GenerateData().

template<typename TDisplacementField >
virtual void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::SetLambda ( ValueType  _arg)
virtual

Set the regularization weight lambda.

template<typename TDisplacementField >
virtual void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::SetMu ( ValueType  _arg)
virtual

Set the regularization weight mu.

template<typename TDisplacementField >
virtual void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::SolveElasticLES ( )
protectedvirtual

solve the LES after forward FFTs (before backward FFTs)

template<typename TDisplacementField >
static ITK_THREAD_RETURN_TYPE itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::SolveElasticLESThreaderCallback ( void *  vargs)
staticprivate
template<typename TDisplacementField >
virtual void itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::ThreadedSolveElasticLES ( OffsetValueType  from,
OffsetValueType  to 
)
protectedvirtual

solve the LES after forward FFTs (and before backward FFTs). Multithreaded method.

Member Data Documentation

template<typename TDisplacementField >
constexpr unsigned int itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::ImageDimension = TDisplacementField::ImageDimension
static

Dimensionality of input and output data is assumed to be the same.

Definition at line 78 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
OffsetValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_ComplexOffsetTable[ImageDimension]
private
template<typename TDisplacementField >
DisplacementFieldType::SizeType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_ComplexSize
private

The size of the complex buffer.

Definition at line 170 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
ValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_Lambda
private

Weight of the regularization term.

Definition at line 155 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
double* itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_MatrixCos[ImageDimension]
private

FFT matrix

Definition at line 178 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
double* itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_MatrixSin[ImageDimension]
private
template<typename TDisplacementField >
ValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_Mu
private

Weight of the regularization term.

Definition at line 158 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
DisplacementFieldType::SizeType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_Size
private

The size of the displacement field.

Definition at line 164 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
DisplacementFieldType::SpacingType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_Spacing
private

The spacing of the displacement field.

Definition at line 161 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
OffsetValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_TotalComplexSize
private

Number of pixels of the complex buffer.

Definition at line 173 of file itkVariationalRegistrationElasticRegularizer.h.

template<typename TDisplacementField >
OffsetValueType itk::VariationalRegistrationElasticRegularizer< TDisplacementField >::m_TotalSize
private

Number of pixels of the displacement field.

Definition at line 167 of file itkVariationalRegistrationElasticRegularizer.h.


The documentation for this class was generated from the following file: