itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField > Class Template Reference
[Finite Difference Functions]

#include <itkPDEDeformableRegistrationFunction.h>

Inheritance diagram for itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >:

Collaboration diagram for itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >:

List of all members.

Public Types

typedef SmartPointer< const Self > ConstPointer

typedef
ZeroFluxNeumannBoundaryCondition
< ImageType > DefaultBoundaryConditionType

typedef TDeformationField DeformationFieldType

typedef
DeformationFieldType::Pointer DeformationFieldTypePointer

typedef
FixedImageType::ConstPointer FixedImagePointer

typedef TFixedImage FixedImageType

typedef Vector< float,
itkGetStaticConstMacro(ImageDimension)> FloatOffsetType

typedef TDeformationField ImageType

typedef
MovingImageType::ConstPointer MovingImagePointer

typedef TMovingImage MovingImageType

typedef Vector< PixelRealType,
itkGetStaticConstMacro(ImageDimension)> NeighborhoodScalesType

typedef
ConstNeighborhoodIterator
< TDeformationField,
DefaultBoundaryConditionType > NeighborhoodType

typedef double PixelRealType

typedef ImageType::PixelType PixelType

typedef SmartPointer< Self > Pointer

typedef
ConstNeighborhoodIterator
< TDeformationField >
::RadiusType RadiusType

typedef
PDEDeformableRegistrationFunction Self

typedef
FiniteDifferenceFunction
< TDeformationField > Superclass

typedef double TimeStepType

Public Member Functions

virtual TimeStepType ComputeGlobalTimeStep (void *GlobalData) const =0

const NeighborhoodScalesType ComputeNeighborhoodScales () const

virtual PixelType ComputeUpdate (const NeighborhoodType &neighborhood, void *globalData, const FloatOffsetType &offset=FloatOffsetType(0.0))=0

virtual Pointer CreateAnother () const

virtual void Delete ()

DeformationFieldType * GetDeformationField (void)

double GetEnergy () const

const FixedImageType * GetFixedImage (void) const

virtual void * GetGlobalDataPointer () const =0

double GetGradientStep () const

const MovingImageType * GetMovingImage (void) const

virtual const char * GetNameOfClass () const

bool GetNormalizeGradient () const

const RadiusType & GetRadius () const

virtual int GetReferenceCount () const

virtual void InitializeIteration ()

itkStaticConstMacro (ImageDimension, unsigned int, ImageType::ImageDimension)

void Print (std::ostream &os, Indent indent=0) const

virtual void Register () const

virtual void ReleaseGlobalDataPointer (void *GlobalData) const =0

void SetDeformationField (DeformationFieldTypePointer ptr)

void SetEnergy (double e)

void SetFixedImage (const FixedImageType *ptr)

void SetGradientStep (double e)

void SetMovingImage (const MovingImageType *ptr)

void SetNormalizeGradient (bool e)

void SetRadius (const RadiusType &r)

virtual void SetReferenceCount (int)

virtual void UnRegister () const

void SetScaleCoefficients (PixelRealType vals[ImageDimension])

Static Public Member Functions

static void BreakOnError ()

static Pointer New ()

Protected Types

typedef int InternalReferenceCountType

Protected Member Functions

PDEDeformableRegistrationFunction ()

void PrintSelf (std::ostream &os, Indent indent) const

~PDEDeformableRegistrationFunction ()

virtual void PrintHeader (std::ostream &os, Indent indent) const

virtual void PrintTrailer (std::ostream &os, Indent indent) const

Protected Attributes

DeformationFieldTypePointer m_DeformationField

double m_Energy

FixedImagePointer m_FixedImage

double m_GradientStep

MovingImagePointer m_MovingImage

bool m_NormalizeGradient

RadiusType m_Radius

InternalReferenceCountType m_ReferenceCount

SimpleFastMutexLock m_ReferenceCountLock

PixelRealType m_ScaleCoefficients [ImageDimension]

Detailed Description

template<class TFixedImage, class TMovingImage, class TDeformationField>
class itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >

This is an abstract base class for all PDE functions which drives a deformable registration algorithm. It is used by PDEDeformationRegistrationFilter subclasses to compute the output deformation field which will map a moving image onto a fixed image.

This class is templated over the fixed image type, moving image type and the deformation field type.

See also:: PDEDeformableRegistrationFilter

Definition at line 39 of file itkPDEDeformableRegistrationFunction.h.

Member Typedef Documentation

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef SmartPointer<const Self> itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::ConstPointer

Reimplemented from itk::FiniteDifferenceFunction< TDeformationField >.

Definition at line 47 of file itkPDEDeformableRegistrationFunction.h.

typedef ZeroFluxNeumannBoundaryCondition<ImageType> itk::FiniteDifferenceFunction< TDeformationField >::DefaultBoundaryConditionType [inherited]

The default boundary condition for finite difference functions that is used unless overridden in the Evaluate() method.

Definition at line 92 of file itkFiniteDifferenceFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef TDeformationField itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::DeformationFieldType

Deformation field type.

Definition at line 62 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef DeformationFieldType::Pointer itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::DeformationFieldTypePointer

Definition at line 64 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef FixedImageType::ConstPointer itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::FixedImagePointer

Definition at line 59 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef TFixedImage itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::FixedImageType

FixedImage image type.

Definition at line 58 of file itkPDEDeformableRegistrationFunction.h.

typedef Vector<float,itkGetStaticConstMacro(ImageDimension)> itk::FiniteDifferenceFunction< TDeformationField >::FloatOffsetType [inherited]

A floating point offset from an image grid location. Used for interpolation among grid values in a neighborhood.

Definition at line 107 of file itkFiniteDifferenceFunction.h.

typedef TDeformationField itk::FiniteDifferenceFunction< TDeformationField >::ImageType [inherited]

Extract some parameters from the image type

Definition at line 76 of file itkFiniteDifferenceFunction.h.

typedef int itk::LightObject::InternalReferenceCountType [protected, inherited]

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 139 of file itkLightObject.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef MovingImageType::ConstPointer itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::MovingImagePointer

Definition at line 55 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef TMovingImage itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::MovingImageType

MovingImage image type.

Definition at line 51 of file itkPDEDeformableRegistrationFunction.h.

typedef Vector<PixelRealType,itkGetStaticConstMacro(ImageDimension)> itk::FiniteDifferenceFunction< TDeformationField >::NeighborhoodScalesType [inherited]

The type of data structure that holds the scales with which the neighborhood is weighted to properly account for spacing and neighborhood radius.

Definition at line 103 of file itkFiniteDifferenceFunction.h.

typedef ConstNeighborhoodIterator<TDeformationField , DefaultBoundaryConditionType> itk::FiniteDifferenceFunction< TDeformationField >::NeighborhoodType [inherited]

The type of data structure that is passed to this function object to evaluate at a pixel that does not lie on a data set boundary.

Definition at line 99 of file itkFiniteDifferenceFunction.h.

typedef double itk::FiniteDifferenceFunction< TDeformationField >::PixelRealType [inherited]

Definition at line 81 of file itkFiniteDifferenceFunction.h.

typedef ImageType::PixelType itk::FiniteDifferenceFunction< TDeformationField >::PixelType [inherited]

Definition at line 80 of file itkFiniteDifferenceFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef SmartPointer<Self> itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::Pointer

Reimplemented from itk::FiniteDifferenceFunction< TDeformationField >.

Definition at line 46 of file itkPDEDeformableRegistrationFunction.h.

typedef ConstNeighborhoodIterator<TDeformationField >::RadiusType itk::FiniteDifferenceFunction< TDeformationField >::RadiusType [inherited]

Neighborhood radius type

Definition at line 95 of file itkFiniteDifferenceFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef PDEDeformableRegistrationFunction itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::Self

Standard class typedefs.

Reimplemented from itk::FiniteDifferenceFunction< TDeformationField >.

Definition at line 44 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

typedef FiniteDifferenceFunction<TDeformationField> itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::Superclass

Reimplemented from itk::FiniteDifferenceFunction< TDeformationField >.

Definition at line 45 of file itkPDEDeformableRegistrationFunction.h.

typedef double itk::FiniteDifferenceFunction< TDeformationField >::TimeStepType [inherited]

Define the TimeStepType to always be double.

Definition at line 87 of file itkFiniteDifferenceFunction.h.

Constructor & Destructor Documentation

template<class TFixedImage, class TMovingImage, class TDeformationField>

itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::PDEDeformableRegistrationFunction ( ) [inline, protected]

Definition at line 99 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::~PDEDeformableRegistrationFunction ( ) [inline, protected]

Definition at line 109 of file itkPDEDeformableRegistrationFunction.h.

Member Function Documentation

static void itk::LightObject::BreakOnError ( ) [static, inherited]

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

virtual TimeStepType itk::FiniteDifferenceFunction< TDeformationField >::ComputeGlobalTimeStep ( void * GlobalData ) const [pure virtual, inherited]

Computes the time step for an update given a global data structure. The data used in the computation may take different forms depending on the nature of the equations. This global data cannot be kept in the instance of the equation object itself since the equation object must remain stateless for thread safety. The global data is therefore managed for each thread by the finite difference solver filters.

const NeighborhoodScalesType itk::FiniteDifferenceFunction< TDeformationField >::ComputeNeighborhoodScales ( ) const [inherited]

Compute the scales that weight the neighborhood during difference operations to properly account for spacing and neighborhood radius

virtual PixelType itk::FiniteDifferenceFunction< TDeformationField >::ComputeUpdate	(	const NeighborhoodType &	neighborhood,
		void *	globalData,
		const FloatOffsetType &	offset = `FloatOffsetType(0.0)`
	)			`[pure virtual, inherited]`

This method is called by a finite difference solver image filter at each pixel that does not lie on a data set boundary. The width of the data set boundary is defined by the width of the neighborhood being evaluated.

The neighborhood argument is the neighborhood data. The globalData argument is a pointer to a data structure that holds values that need to be persistent across calls to this function, but cannot be stored in the function object itself for thread-safety reasons. Examples are values needed to compute the time-step for an iteration of the solver.

See also:: InitializeIteration
ComputeGlobalTimeStep

virtual Pointer itk::LightObject::CreateAnother ( ) const [virtual, inherited]

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented in itk::Object.

virtual void itk::LightObject::Delete ( ) [virtual, inherited]

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

template<class TFixedImage, class TMovingImage, class TDeformationField>

DeformationFieldType* itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetDeformationField ( void ) [inline]

Get the deformation field. This function should have been declared const. It is not for backward compatibility reasons.

Definition at line 88 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

double itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetEnergy ( ) const [inline]

Definition at line 92 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

const FixedImageType* itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetFixedImage ( void ) const [inline]

Get the fixed image.

Definition at line 79 of file itkPDEDeformableRegistrationFunction.h.

virtual void* itk::FiniteDifferenceFunction< TDeformationField >::GetGlobalDataPointer ( ) const [pure virtual, inherited]

Returns a pointer to a global data structure that is passed to this object from the solver at each calculation. The idea is that the solver holds the state of any global values needed to calculate the time step, while the equation object performs the actual calculations.

The global data should also be initialized in this method.

template<class TFixedImage, class TMovingImage, class TDeformationField>

double itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetGradientStep ( ) const [inline]

Definition at line 94 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

const MovingImageType* itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetMovingImage ( void ) const [inline]

Get the moving image.

Definition at line 71 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

virtual const char* itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetNameOfClass ( ) const [virtual]

Run-time type information (and related methods)

Reimplemented from itk::FiniteDifferenceFunction< TDeformationField >.

template<class TFixedImage, class TMovingImage, class TDeformationField>

bool itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::GetNormalizeGradient ( ) const [inline]

Definition at line 96 of file itkPDEDeformableRegistrationFunction.h.

const RadiusType& itk::FiniteDifferenceFunction< TDeformationField >::GetRadius ( void ) const [inline, inherited]

Returns the radius of the neighborhood this FiniteDifferenceFunction needs to perform its calculations.

Definition at line 146 of file itkFiniteDifferenceFunction.h.

virtual int itk::LightObject::GetReferenceCount ( ) const [inline, virtual, inherited]

Gets the reference count on this object.

Definition at line 106 of file itkLightObject.h.

virtual void itk::FiniteDifferenceFunction< TDeformationField >::InitializeIteration ( ) [inline, virtual, inherited]

This method allows the function to set its state before each iteration of the finite difference solver (image filter) that uses it. This is a thread-safe time to manipulate the object's state.

An example of how this can be used: the Anisotropic diffusion class of FiniteDifferenceFunctions use this method to pre-calculate an average gradient magnitude across the entire image region. This value is set in the function object and used by the ComputeUpdate methods that are called at each pixel as a constant.

Definition at line 118 of file itkFiniteDifferenceFunction.h.

itk::FiniteDifferenceFunction< TDeformationField >::itkStaticConstMacro	(	ImageDimension	,
		unsigned	int,
		ImageType::ImageDimension
	)			`[inherited]`

Save image dimension.

static Pointer itk::LightObject::New ( ) [static, inherited]

Method for creation through the object factory.

Referenced by itk::EncapsulateMetaData(), and itk::RegionBasedLevelSetFunctionSharedData< TInputImage, TFeatureImage, TSingleData >::SetFunctionCount().

void itk::LightObject::Print	(	std::ostream &	os,
		Indent	indent = `0`
	)			const `[inherited]`

Cause the object to print itself out.

Referenced by itk::WeakPointer< ProcessObject >::Print().

virtual void itk::LightObject::PrintHeader	(	std::ostream &	os,
		Indent	indent
	)			const `[protected, virtual, inherited]`

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)			const `[inline, protected, virtual]`

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::FiniteDifferenceFunction< TDeformationField >.

Definition at line 111 of file itkPDEDeformableRegistrationFunction.h.

virtual void itk::LightObject::PrintTrailer	(	std::ostream &	os,
		Indent	indent
	)			const `[protected, virtual, inherited]`

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

virtual void itk::LightObject::Register ( ) const [virtual, inherited]

Increase the reference count (mark as used by another object).

Reimplemented in itk::Object.

virtual void itk::FiniteDifferenceFunction< TDeformationField >::ReleaseGlobalDataPointer ( void * GlobalData ) const [pure virtual, inherited]

When the finite difference solver filter has finished using a global data pointer, it passes it to this method, which frees the memory.

The solver cannot free the memory because it does not know the type to which the pointer points.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetDeformationField ( DeformationFieldTypePointer ptr ) [inline]

Set the deformation field image.

Definition at line 83 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetEnergy ( double e ) [inline]

Definition at line 91 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetFixedImage ( const FixedImageType * ptr ) [inline]

Set the fixed image.

Definition at line 75 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetGradientStep ( double e ) [inline]

Definition at line 93 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetMovingImage ( const MovingImageType * ptr ) [inline]

Set the moving image.

Definition at line 67 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

void itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::SetNormalizeGradient ( bool e ) [inline]

Definition at line 95 of file itkPDEDeformableRegistrationFunction.h.

void itk::FiniteDifferenceFunction< TDeformationField >::SetRadius ( const RadiusType & r ) [inline, inherited]

Sets the radius of the neighborhood this FiniteDifferenceFunction needs to perform its calculations.

Definition at line 141 of file itkFiniteDifferenceFunction.h.

virtual void itk::LightObject::SetReferenceCount ( int ) [virtual, inherited]

Sets the reference count on this object. This is a dangerous method, use it with care.

Reimplemented in itk::Object.

void itk::FiniteDifferenceFunction< TDeformationField >::SetScaleCoefficients ( PixelRealType vals[ImageDimension] ) [inline, inherited]

Set the ScaleCoefficients for the difference operators. The defaults a 1.0. These can be set to take the image spacing into account.

Definition at line 152 of file itkFiniteDifferenceFunction.h.

virtual void itk::LightObject::UnRegister ( ) const [virtual, inherited]

Decrease the reference count (release by another object).

Reimplemented in itk::Object.

Member Data Documentation

template<class TFixedImage, class TMovingImage, class TDeformationField>

DeformationFieldTypePointer itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_DeformationField [protected]

The deformation field.

Definition at line 128 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

double itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_Energy [mutable, protected]

Definition at line 130 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

FixedImagePointer itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_FixedImage [protected]

The fixed image.

Definition at line 125 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

double itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_GradientStep [mutable, protected]

Definition at line 132 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

MovingImagePointer itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_MovingImage [protected]

The moving image.

Definition at line 122 of file itkPDEDeformableRegistrationFunction.h.

template<class TFixedImage, class TMovingImage, class TDeformationField>

bool itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >::m_NormalizeGradient [protected]

Definition at line 131 of file itkPDEDeformableRegistrationFunction.h.

RadiusType itk::FiniteDifferenceFunction< TDeformationField >::m_Radius [protected, inherited]

Definition at line 203 of file itkFiniteDifferenceFunction.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount [mutable, protected, inherited]

Number of uses of this object by other objects.

Definition at line 144 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock [mutable, protected, inherited]

Mutex lock to protect modification to the reference count

Definition at line 147 of file itkLightObject.h.

PixelRealType itk::FiniteDifferenceFunction< TDeformationField >::m_ScaleCoefficients[ImageDimension] [protected, inherited]

Definition at line 204 of file itkFiniteDifferenceFunction.h.

The documentation for this class was generated from the following file:

itkPDEDeformableRegistrationFunction.h


Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef ZeroFluxNeumannBoundaryCondition < ImageType >	DefaultBoundaryConditionType
typedef TDeformationField	DeformationFieldType
typedef DeformationFieldType::Pointer	DeformationFieldTypePointer
typedef FixedImageType::ConstPointer	FixedImagePointer
typedef TFixedImage	FixedImageType
typedef Vector< float, itkGetStaticConstMacro(ImageDimension)>	FloatOffsetType
typedef TDeformationField	ImageType
typedef MovingImageType::ConstPointer	MovingImagePointer
typedef TMovingImage	MovingImageType
typedef Vector< PixelRealType, itkGetStaticConstMacro(ImageDimension)>	NeighborhoodScalesType
typedef ConstNeighborhoodIterator < TDeformationField, DefaultBoundaryConditionType >	NeighborhoodType
typedef double	PixelRealType
typedef ImageType::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef ConstNeighborhoodIterator < TDeformationField > ::RadiusType	RadiusType
typedef PDEDeformableRegistrationFunction	Self
typedef FiniteDifferenceFunction < TDeformationField >	Superclass
typedef double	TimeStepType
Public Member Functions
virtual TimeStepType	ComputeGlobalTimeStep (void *GlobalData) const =0
const NeighborhoodScalesType	ComputeNeighborhoodScales () const
virtual PixelType	ComputeUpdate (const NeighborhoodType &neighborhood, void *globalData, const FloatOffsetType &offset=FloatOffsetType(0.0))=0
virtual Pointer	CreateAnother () const
virtual void	Delete ()
DeformationFieldType *	GetDeformationField (void)
double	GetEnergy () const
const FixedImageType *	GetFixedImage (void) const
virtual void *	GetGlobalDataPointer () const =0
double	GetGradientStep () const
const MovingImageType *	GetMovingImage (void) const
virtual const char *	GetNameOfClass () const
bool	GetNormalizeGradient () const
const RadiusType &	GetRadius () const
virtual int	GetReferenceCount () const
virtual void	InitializeIteration ()
	itkStaticConstMacro (ImageDimension, unsigned int, ImageType::ImageDimension)
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	ReleaseGlobalDataPointer (void *GlobalData) const =0
void	SetDeformationField (DeformationFieldTypePointer ptr)
void	SetEnergy (double e)
void	SetFixedImage (const FixedImageType *ptr)
void	SetGradientStep (double e)
void	SetMovingImage (const MovingImageType *ptr)
void	SetNormalizeGradient (bool e)
void	SetRadius (const RadiusType &r)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const

void	SetScaleCoefficients (PixelRealType vals[ImageDimension])
Static Public Member Functions
static void	BreakOnError ()
static Pointer	New ()
Protected Types

typedef int	InternalReferenceCountType
Protected Member Functions
	PDEDeformableRegistrationFunction ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~PDEDeformableRegistrationFunction ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
Protected Attributes
DeformationFieldTypePointer	m_DeformationField
double	m_Energy
FixedImagePointer	m_FixedImage
double	m_GradientStep
MovingImagePointer	m_MovingImage
bool	m_NormalizeGradient
RadiusType	m_Radius
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock
PixelRealType	m_ScaleCoefficients [ImageDimension]

itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField > Class Template Reference [Finite Difference Functions]

Public Types

Public Member Functions

Static Public Member Functions

Protected Types

Protected Member Functions

Protected Attributes

Detailed Description

template<class TFixedImage, class TMovingImage, class TDeformationField> class itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField > Class Template Reference
[Finite Difference Functions]

template<class TFixedImage, class TMovingImage, class TDeformationField>
class itk::PDEDeformableRegistrationFunction< TFixedImage, TMovingImage, TDeformationField >