ITK  5.4.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Private Attributes | List of all members
itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType > Class Template Reference

#include <itkThresholdSegmentationLevelSetImageFilter.h>

Detailed Description

template<typename TInputImage, typename TFeatureImage, typename TOutputPixelType = float>
class itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >

Segments structures in images based on intensity values.

IMPORTANT
The SegmentationLevelSetImageFilter class and the ThresholdSegmentationLevelSetFunction class contain additional information necessary to the full understanding of how to use this filter.
OVERVIEW
This class is a level set method segmentation filter. It constructs a speed function which is close to zero at the upper and lower bounds of an intensity window, effectively locking the propagating front onto those edges. Elsewhere, the front will propagate quickly.
INPUTS
This filter requires two inputs. The first input is a seed image. This seed image must contain an isosurface that you want to use as the seed for your segmentation. It can be a binary, graylevel, or floating point image. The only requirement is that it contain a closed isosurface that you will identify as the seed by setting the IsosurfaceValue parameter of the filter. For a binary image you will want to set your isosurface value halfway between your on and off values (i.e. for 0's and 1's, use an isosurface value of 0.5).
The second input is the feature image. This is the image from which the speed function will be calculated. For most applications, this is the image that you want to segment. The desired isosurface in your seed image should lie within the region of your feature image that you are trying to segment. Note that this filter does no preprocessing of the feature image before thresholding.
See SegmentationLevelSetImageFilter for more information on Inputs.
OUTPUTS
The filter outputs a single, scalar, real-valued image. Positive values in the output image are inside the segmented region and negative values in the image are outside of the inside region. The zero crossings of the image correspond to the position of the level set front.
See SparseFieldLevelSetImageFilter and SegmentationLevelSetImageFilter for more information.
PARAMETERS
In addition to parameters described in SegmentationLevelSetImageFilter, this filter adds the UpperThreshold and LowerThreshold. See ThresholdSegmentationLevelSetFunction for a description of how these values affect the segmentation.
See also
SegmentationLevelSetImageFilter
ThresholdSegmentationLevelSetFunction,
SparseFieldLevelSetImageFilter
Examples
Examples/Segmentation/ThresholdSegmentationLevelSetImageFilter.cxx.

Definition at line 84 of file itkThresholdSegmentationLevelSetImageFilter.h.

+ Inheritance diagram for itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >:
+ Collaboration diagram for itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = ThresholdSegmentationLevelSetImageFilter
 
using Superclass = SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
 
using ThresholdFunctionPointer = typename ThresholdFunctionType::Pointer
 
using ThresholdFunctionType = ThresholdSegmentationLevelSetFunction< OutputImageType, FeatureImageType >
 
- Public Types inherited from itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
using ConstPointer = SmartPointer< const Self >
 
using FeatureImageType = TFeatureImage
 
using OutputImageType = Image< TOutputPixelType, Self::InputImageDimension >
 
using Pointer = SmartPointer< Self >
 
using SegmentationFunctionType = SegmentationLevelSetFunction< OutputImageType, FeatureImageType >
 
using Self = SegmentationLevelSetImageFilter
 
using SpeedImageType = typename SegmentationFunctionType::ImageType
 
using Superclass = SparseFieldLevelSetImageFilter< TInputImage, OutputImageType >
 
using VectorImageType = typename SegmentationFunctionType::VectorImageType
 
- Public Types inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using IndexType = typename OutputImageType::IndexType
 
using InputImageType = TInputImage
 
using LayerListType = std::vector< LayerPointerType >
 
using LayerNodeStorageType = ObjectStore< LayerNodeType >
 
using LayerNodeType = SparseFieldLevelSetNode< IndexType >
 
using LayerPointerType = typename LayerType::Pointer
 
using LayerType = SparseFieldLayer< LayerNodeType >
 
using OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension >
 
using Pointer = SmartPointer< Self >
 
using Self = SparseFieldLevelSetImageFilter
 
using StatusImageType = Image< StatusType, Self::ImageDimension >
 
using StatusType = signed char
 
using Superclass = FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
 
using UpdateBufferType = std::vector< ValueType >
 
using ValueType = typename OutputImageType::ValueType
 
- Public Types inherited from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using FiniteDifferenceFunctionType = FiniteDifferenceFunction< Image< TOutputPixelType, TInputImage::ImageDimension > >
 
using InputImageType = TInputImage
 
using InputPixelType = typename TInputImage::PixelType
 
using InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType
 
using NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType
 
using OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension >
 
using OutputPixelType = typename Image< TOutputPixelType, TInputImage::ImageDimension > ::PixelType
 
using OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType
 
using PixelType = OutputPixelType
 
using Pointer = SmartPointer< Self >
 
using RadiusType = typename FiniteDifferenceFunctionType::RadiusType
 
using Self = FiniteDifferenceImageFilter
 
using Superclass = InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
 
using TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType
 
- Public Types inherited from itk::InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
 
- Public Types inherited from itk::ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = Image< TOutputPixelType, TInputImage::ImageDimension >
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

ValueType GetEdgeWeight () const
 
ValueType GetLowerThreshold () const
 
ValueType GetSmoothingConductance () const
 
int GetSmoothingIterations () const
 
ValueType GetSmoothingTimeStep () const
 
ValueType GetUpperThreshold () const
 
 itkOverrideGetNameOfClassMacro (ThresholdSegmentationLevelSetImageFilter)
 
void SetLowerThreshold (ValueType v)
 
void SetUpperThreshold (ValueType v)
 
void SetEdgeWeight (ValueType v)
 
void SetSmoothingIterations (int v)
 
void SetSmoothingTimeStep (ValueType v)
 
void SetSmoothingConductance (ValueType v)
 
- Public Member Functions inherited from itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
void GenerateAdvectionImage ()
 
void GenerateSpeedImage ()
 
virtual const VectorImageTypeGetAdvectionImage () const
 
ValueType GetAdvectionScaling () const
 
ValueType GetCurvatureScaling () const
 
double GetMaximumCurvatureTimeStep () const
 
unsigned int GetMaximumIterations ()
 
double GetMaximumPropagationTimeStep () const
 
ValueType GetPropagationScaling () const
 
virtual SegmentationFunctionTypeGetSegmentationFunction ()
 
virtual const SpeedImageTypeGetSpeedImage () const
 
bool GetUseMinimalCurvature () const
 
bool GetUseNegativeFeatures () const
 
 itkOverrideGetNameOfClassMacro (SegmentationLevelSetImageFilter)
 
void SetAdvectionImage (VectorImageType *v)
 
void SetInput2 (const FeatureImageType *input)
 
virtual void SetSegmentationFunction (SegmentationFunctionType *s)
 
void SetSpeedImage (SpeedImageType *s)
 
void SetUseNegativeFeaturesOff ()
 
void UseMinimalCurvatureOff ()
 
void UseMinimalCurvatureOn ()
 
void SetMaximumIterations (unsigned int i)
 
virtual void SetFeatureImage (const FeatureImageType *f)
 
virtual const FeatureImageTypeGetFeatureImage () const
 
virtual void SetInitialImage (const InputImageType *input)
 
virtual const InputImageTypeGetInitialImage () const
 
void SetUseNegativeFeaturesOn ()
 
void SetUseNegativeFeatures (bool u)
 
virtual void SetReverseExpansionDirection (bool _arg)
 
virtual bool GetReverseExpansionDirection () const
 
virtual void ReverseExpansionDirectionOn ()
 
virtual void SetAutoGenerateSpeedAdvection (bool _arg)
 
virtual bool GetAutoGenerateSpeedAdvection () const
 
virtual void AutoGenerateSpeedAdvectionOn ()
 
void SetFeatureScaling (ValueType v)
 
void SetPropagationScaling (ValueType v)
 
void SetAdvectionScaling (ValueType v)
 
void SetCurvatureScaling (ValueType v)
 
void SetUseMinimalCurvature (bool b)
 
void SetMaximumCurvatureTimeStep (double n)
 
void SetMaximumPropagationTimeStep (double n)
 
- Public Member Functions inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
 itkOverrideGetNameOfClassMacro (SparseFieldLevelSetImageFilter)
 
virtual void SetNumberOfLayers (unsigned int _arg)
 
virtual unsigned int GetNumberOfLayers () const
 
virtual void SetIsoSurfaceValue (ValueType _arg)
 
virtual ValueType GetIsoSurfaceValue () const
 
virtual void SetInterpolateSurfaceLocation (bool _arg)
 
virtual bool GetInterpolateSurfaceLocation () const
 
void InterpolateSurfaceLocationOn ()
 
void InterpolateSurfaceLocationOff ()
 
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
virtual const FiniteDifferenceFunctionType ::PointerGetDifferenceFunction () const
 
virtual const IdentifierTypeGetElapsedIterations () const
 
virtual bool GetIsInitialized ()
 
 itkOverrideGetNameOfClassMacro (FiniteDifferenceImageFilter)
 
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
 
virtual void SetIsInitialized (bool _arg)
 
void SetStateToInitialized ()
 
void SetStateToUninitialized ()
 
virtual void SetNumberOfIterations (IdentifierType _arg)
 
virtual const IdentifierTypeGetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
virtual bool CanRunInPlace () const
 
 itkOverrideGetNameOfClassMacro (InPlaceImageFilter)
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
 itkOverrideGetNameOfClassMacro (ImageToImageFilter)
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *input)
 
virtual void PushFrontInput (const InputImageType *input)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *input)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
OutputImageTypeGetOutput (unsigned int idx)
 
 itkOverrideGetNameOfClassMacro (ImageSource)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *graft)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *graft)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual float GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
void IncrementProgress (float increment)
 
 itkOverrideGetNameOfClassMacro (ProcessObject)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool val)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
LightObject::Pointer CreateAnother () const override
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
 itkOverrideGetNameOfClassMacro (Object)
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkVirtualGetNameOfClassMacro (LightObject)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static double GetGlobalDefaultCoordinateTolerance ()
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static void SetGlobalDefaultDirectionTolerance (double)
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Member Functions

void PrintSelf (std::ostream &os, Indent indent) const override
 
 ThresholdSegmentationLevelSetImageFilter ()
 
 ~ThresholdSegmentationLevelSetImageFilter () override=default
 
- Protected Member Functions inherited from itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
void GenerateData () override
 
 SegmentationLevelSetImageFilter ()
 
 ~SegmentationLevelSetImageFilter () override=default
 
void InitializeIteration () override
 
- Protected Member Functions inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
void AllocateUpdateBuffer () override
 
void ApplyUpdate (const TimeStepType &dt) override
 
TimeStepType CalculateChange () override
 
virtual ValueType CalculateUpdateValue (const IndexType &, const TimeStepType &dt, const ValueType &value, const ValueType &change)
 
void ConstructActiveLayer ()
 
void ConstructLayer (StatusType from, StatusType to)
 
void CopyInputToOutput () override
 
virtual ValueType GetValueOne () const
 
virtual ValueType GetValueZero () const
 
void Initialize () override
 
void InitializeActiveLayerValues ()
 
virtual void InitializeBackgroundPixels ()
 
void PostProcessOutput () override
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
void ProcessOutsideList (LayerType *OutsideList, StatusType ChangeToStatus)
 
void ProcessStatusList (LayerType *InputList, LayerType *OutputList, StatusType ChangeToStatus, StatusType SearchForStatus)
 
void PropagateAllLayerValues ()
 
void PropagateLayerValues (StatusType from, StatusType to, StatusType promote, int InOrOut)
 
 SparseFieldLevelSetImageFilter ()
 
void UpdateActiveLayerValues (TimeStepType dt, LayerType *UpList, LayerType *DownList)
 
 ~SparseFieldLevelSetImageFilter () override=default
 
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
 FiniteDifferenceImageFilter ()
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
virtual bool Halt ()
 
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const BooleanStdVectorType &valid) const
 
virtual void SetElapsedIterations (IdentifierType _arg)
 
virtual bool ThreadedHalt (void *)
 
 ~FiniteDifferenceImageFilter () override=default
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()=default
 
void ReleaseInputs () override
 
 ~InPlaceImageFilter () override=default
 
void AllocateOutputs () override
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
void VerifyInputInformation () ITKv5_CONST override
 
 ~ImageToImageFilter () override=default
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &name, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *object)
 
virtual void SetPrimaryOutput (DataObject *object)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType i)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType i) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual bool GetThreaderUpdateProgress () const
 
virtual void ThreaderUpdateProgressOn ()
 
virtual void SetThreaderUpdateProgress (bool arg)
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Attributes

ThresholdFunctionPointer m_ThresholdFunction {}
 

Additional Inherited Members

- Static Public Attributes inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
static constexpr unsigned int OutputImageDimension
 
- Protected Types inherited from itk::ImageToImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float progressFixedToFloat (uint32_t fixed)
 
static uint32_t progressFloatToFixed (float f)
 
- Protected Attributes inherited from itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >
bool m_AutoGenerateSpeedAdvection {}
 
bool m_ReverseExpansionDirection {}
 
- Protected Attributes inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
double m_ConstantGradientValue
 
const InputImageTypem_InputImage
 
bool m_InterpolateSurfaceLocation
 
ValueType m_IsoSurfaceValue
 
LayerNodeStorageType::Pointer m_LayerNodeStore
 
LayerListType m_Layers
 
SparseFieldCityBlockNeighborList< NeighborhoodIterator< OutputImageType > > m_NeighborList
 
unsigned int m_NumberOfLayers
 
OutputImageTypem_OutputImage
 
OutputImageType::Pointer m_ShiftedImage
 
StatusImageType::Pointer m_StatusImage
 
UpdateBufferType m_UpdateBuffer
 
- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
IdentifierType m_ElapsedIterations
 
bool m_IsInitialized
 
bool m_ManualReinitialization
 
double m_MaximumRMSError
 
IdentifierType m_NumberOfIterations
 
double m_RMSChange
 
- Protected Attributes inherited from itk::ImageSource< Image< TOutputPixelType, TInputImage::ImageDimension > >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime {}
 
bool m_Updating {}
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount {}
 
- Static Protected Attributes inherited from itk::SparseFieldLevelSetImageFilter< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >
static StatusType m_StatusActiveChangingDown
 
static StatusType m_StatusActiveChangingUp
 
static StatusType m_StatusBoundaryPixel
 
static StatusType m_StatusChanging
 
static StatusType m_StatusNull
 
static ValueType m_ValueOne
 
static ValueType m_ValueZero
 

Member Typedef Documentation

◆ ConstPointer

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
using itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ConstPointer = SmartPointer<const Self>

◆ Pointer

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
using itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::Pointer = SmartPointer<Self>

◆ Self

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
using itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::Self = ThresholdSegmentationLevelSetImageFilter

Standard class type aliases

Definition at line 91 of file itkThresholdSegmentationLevelSetImageFilter.h.

◆ Superclass

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
using itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::Superclass = SegmentationLevelSetImageFilter<TInputImage, TFeatureImage, TOutputPixelType>

◆ ThresholdFunctionPointer

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
using itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ThresholdFunctionPointer = typename ThresholdFunctionType::Pointer

◆ ThresholdFunctionType

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
using itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ThresholdFunctionType = ThresholdSegmentationLevelSetFunction<OutputImageType, FeatureImageType>

Type of the segmentation function

Definition at line 102 of file itkThresholdSegmentationLevelSetImageFilter.h.

Constructor & Destructor Documentation

◆ ~ThresholdSegmentationLevelSetImageFilter()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::~ThresholdSegmentationLevelSetImageFilter ( )
overrideprotecteddefault

◆ ThresholdSegmentationLevelSetImageFilter()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::ThresholdSegmentationLevelSetImageFilter ( )
protected

Member Function Documentation

◆ GetEdgeWeight()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
ValueType itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetEdgeWeight ( ) const
inline

◆ GetLowerThreshold()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
ValueType itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetLowerThreshold ( ) const
inline

◆ GetSmoothingConductance()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
ValueType itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetSmoothingConductance ( ) const
inline

◆ GetSmoothingIterations()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
int itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetSmoothingIterations ( ) const
inline

◆ GetSmoothingTimeStep()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
ValueType itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetSmoothingTimeStep ( ) const
inline

◆ GetUpperThreshold()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
ValueType itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::GetUpperThreshold ( ) const
inline

◆ itkOverrideGetNameOfClassMacro()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::itkOverrideGetNameOfClassMacro ( ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >  )

Run-time type information (and related methods).

◆ New()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
static Pointer itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::New ( )
static

Method for creation through the object factory

◆ PrintSelf()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >.

◆ SetEdgeWeight()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetEdgeWeight ( ValueType  v)
inline

Set/Get the weight applied to the edge (Laplacian) attractor in the speed term function. Zero will turn this term off.

Definition at line 143 of file itkThresholdSegmentationLevelSetImageFilter.h.

◆ SetLowerThreshold()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetLowerThreshold ( ValueType  v)
inline

◆ SetSmoothingConductance()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingConductance ( ValueType  v)
inline

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the smoothing conductance.

Definition at line 194 of file itkThresholdSegmentationLevelSetImageFilter.h.

◆ SetSmoothingIterations()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingIterations ( int  v)
inline

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the number of diffusion iterations.

Definition at line 160 of file itkThresholdSegmentationLevelSetImageFilter.h.

◆ SetSmoothingTimeStep()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingTimeStep ( ValueType  v)
inline

Anisotropic diffusion is applied to the FeatureImage before calculating the Laplacian (edge) term. This method sets/gets the diffusion time step.

Definition at line 177 of file itkThresholdSegmentationLevelSetImageFilter.h.

◆ SetUpperThreshold()

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
void itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUpperThreshold ( ValueType  v)
inline

Get/Set the threshold values that will be used to calculate the speed function.

Definition at line 114 of file itkThresholdSegmentationLevelSetImageFilter.h.

Member Data Documentation

◆ m_ThresholdFunction

template<typename TInputImage , typename TFeatureImage , typename TOutputPixelType = float>
ThresholdFunctionPointer itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::m_ThresholdFunction {}
private

The documentation for this class was generated from the following file: